Dbfetch
ID KY419450; SV 1; linear; genomic DNA; STD; HUM; 3136 BP. XX AC KY419450; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA) gene, HLA-A*26:01:01New3 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3136 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3136 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; f2d540e6122ca959dc14db340d50a65b. DR Ensembl-Gn; ENSG00000206505; homo_sapiens. DR Ensembl-Tr; ENST00000383605; homo_sapiens. DR Ensembl-Tr; ENST00000549224; homo_sapiens. DR IMGT/HLA; HLA-A*26:01:01:08; HLA16669. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3136 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3136 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT mRNA join(<1..209,340..609,852..1127,1728..2003,2103..2219, FT 2658..2690,2833..2880,3050..>3136) FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /product="MHC class I antigen" FT exon <1..209 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=1 FT 5'UTR <1..136 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT CDS join(137..209,340..609,852..1127,1728..2003,2103..2219, FT 2658..2690,2833..2880,3050..3054) FT /codon_start=1 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /product="MHC class I antigen" FT /db_xref="GOA:Q5SPM2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5SPM2" FT /protein_id="ASU50341.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon 340..609 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=2 FT exon 852..1127 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=3 FT exon 1728..2003 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=4 FT exon 2103..2219 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=5 FT exon 2658..2690 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=6 FT exon 2833..2880 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=7 FT exon 3050..>3136 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" FT /number=8 FT 3'UTR 3055..>3136 FT /gene="HLA" FT /allele="HLA-A*26:01:01New3" XX SQ Sequence 3136 BP; 601 A; 902 C; 974 G; 659 T; 0 other; gatactcacg acgcggaccc agttctcact cccattgggt gtcgggtttc cagagaagcc 60 aatcagtgtc gtcgcggtcg cggttctaaa gtccgcacgc acccaccggg actcagattc 120 tccccagacg ccgaggatgg ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg 180 ggccctggcc ctgacccaga cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc 240 tgtggggaga agcaaggggc ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg 300 aggagggtcg ggcgggtctc agccactcct cgcccccagg ctcccactcc atgaggtatt 360 tctacacctc cgtgtcccgg cccggccgcg gggagccccg cttcatcgcc gtgggctacg 420 tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagccagagg atggagccgc 480 gggcgccgtg gatagagcag gaggggccgg agtattggga ccggaacaca cggaatgtga 540 aggcccactc acagactgac cgagcgaacc tggggaccct gcgcggctac tacaaccaga 600 gcgaggacgg tgagtgaccc cggcccgggg cgcaggtcac gacccctcat cccccacgga 660 cgggccaggt cgcccacagt ctccgggtcc gagatccgcc ccgaagccgc gggaccccga 720 gacccttgcc ccgggagagg cccaggcgcc tttacccggt ttcattttca gtttaggcca 780 aaaaatcccc ccgggttggt cggggcgggg cggggctcgg gggaccgggc tgacctcggg 840 gtccgggcca ggttctcaca ccatccagag gatgtatggc tgcgacgtgg ggccggacgg 900 gcgcttcctc cgcgggtacc agcaggacgc ttacgacggc aaggattaca tcgccctgaa 960 cgaggacctg cgctcttgga ccgcggcgga catggcggct cagatcaccc agcgcaagtg 1020 ggagacggcc catgaggcgg agcagtggag agcctacctg gagggccggt gcgtggagtg 1080 gctccgcaga tacctggaga acgggaagga gacgctgcag cgcacgggta ccaggggcca 1140 cggggcgcct ccctgatcgc ctgtagatct cccgggctgg cctcccacaa ggaggggaga 1200 caattgggac caacactaga atatcgccct ccctctggtc ctgagggaga ggaatcctcc 1260 tgggtttcca gatcctgtac cagagagtga ctctgaggtt ccgccctgct ctctgacaca 1320 attaagggat aaaatctctg aaggaatgac gggaagacga tccctcgaat actgatgagt 1380 ggttcccttt gacacacacc ggcagcagcc ttgggcccgt gacttttcct ctcaggcctt 1440 gttctctgct tcacactcaa tgtgtgtggg ggtctgagtc cagcacttct gagtccctca 1500 gcctccactc aggtcaggac cagaagtcgc tgttccctct tcagggacta gaattttcca 1560 cggaatagga gattatccca ggtgcctgtg tccaggctgg tgtctgggtt ctgtgctccc 1620 ttccccatcc caggtgtcct gtccattctc aagatagcca catgtgtgct ggaggagtgt 1680 cccatgacag atgcaaaatg cctgaatgtt ctgactcttc ctgacagacg cccccaagac 1740 gcatatgact caccacgctg tctctgacca tgaggccacc ctgaggtgct gggccctgag 1800 cttctaccct gcggagatca cactgacctg gcagcgggat ggggaggacc agacccagga 1860 cacggagctc gtggagacca ggcctgcagg ggatgggacc ttccagaagt gggcgtctgt 1920 ggtggtgcct tctggacagg agcagagata cacctgccat gtgcagcatg agggtctgcc 1980 caagcccctc accctgagat ggggtaagga gggagacggg ggtgtcatgt cttttaggga 2040 aagcaggagc ctctctgacc tttagcaggg tcagggcccc tcaccttccc ctcttttccc 2100 agagccgtct tcccagccca ccatccccat cgtgggcatc attgctggcc tggttctctt 2160 tggagctgtg atcgctggag ctgtggtcgc tgctgtgatg tggaggagga agagctcagg 2220 tggggaaggg atgaagggtg ggtctgagat ttcttgtctc actgagggtt ccaagaccca 2280 ggtagaagtg tgccctgcct cgttactggg aagcaccatc cacaattatg agcctaccca 2340 gcctgggccc tgtgtgccag cacttactct tttgtaaagc acctgttaaa atgaaggaca 2400 gatttatcac cttgattacg gcggtgatgg gacctgatcc cagcagtcac aagtcacagg 2460 ggaaggtccc tgaggacctt caggagggcg gttggtccag gacccacacc tgctttcttc 2520 atgtttcctg atcccgccct gggtctgcag tcacacattt ctggaaactt ctctgaggtc 2580 caagacttgg aggttcctct aggaccttaa ggccctggct cctttctggt atctcacagg 2640 acattttctt cccacagata gaaaaggagg gagctactct caggctgcaa gtaagtatga 2700 aggaggctga tgcctgaggt ccttgggata ttgtgtttgg gagcccgtgg gggagctcac 2760 ccaccccaca attcctcctc tagccacatg ttctgtggga tctgaccagg ttctgttttt 2820 gtcctacccc aggcagtgac agtgcccagg gctctgatat gtctctcaca gcttgtaaag 2880 gtgagagcct ggagggcctg atgtgtgttg ggtgttgggc ggaacagtgg acgcagctgt 2940 gctatggggt ttctttgcat tggatgtatt gagcatgcga tgggctgttt aaagtgtgac 3000 tcctcactgt gacagatacg aatttgttca tgaatatttt tttctatagt gtgagacagc 3060 tgccttgtgt gggactgaga ggcaagattt gttcctgccc ttccctttgt gacttgaaga 3120 accctgactt tgtttc 3136 //