Dbfetch
ID KY419436; SV 1; linear; genomic DNA; STD; HUM; 3135 BP. XX AC KY419436; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA) gene, HLA-A*02:New2 allele, complete DE cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3135 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3135 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; 7afb4c7c216dde2a2fd09cc280189aec. DR IMGT/HLA; HLA-A*02:528:02; HLA16117. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3135 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3135 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT mRNA join(<1..209,340..609,851..1126,1727..2002,2102..2218, FT 2657..2689,2832..2879,3049..>3135) FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /product="MHC class I antigen" FT exon <1..209 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=1 FT 5'UTR <1..136 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT CDS join(137..209,340..609,851..1126,1727..2002,2102..2218, FT 2657..2689,2832..2879,3049..3053) FT /codon_start=1 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A0U5KJ66" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0U5KJ66" FT /protein_id="ASU50327.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAMGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT exon 340..609 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=2 FT exon 851..1126 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=3 FT exon 1727..2002 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=4 FT exon 2102..2218 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=5 FT exon 2657..2689 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=6 FT exon 2832..2879 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=7 FT exon 3049..>3135 FT /gene="HLA" FT /allele="HLA-A*02:New2" FT /number=8 FT 3'UTR 3054..>3135 FT /gene="HLA" FT /allele="HLA-A*02:New2" XX SQ Sequence 3135 BP; 609 A; 896 C; 965 G; 665 T; 0 other; gatactcacg acgcggaccc agttctcact cccattgggt gtcgggtttc cagagaagcc 60 aatcagtgtc gtcgcggtcg cggttctaaa gtccgcacgc acccaccggg actcagattc 120 tccccagacg ccgaggatgg ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg 180 ggctctggcc ctgacccaga cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc 240 tgtggggaga agcaacgggc ccgcctggcg ggggcgcagg acccgggaag ccgcgccggg 300 aggagggtcg ggcgggtctc agccactcct cgtccccagg ctctcactcc atgaggtatt 360 tcttcacatc cgtgtcccgg cccggccgcg gggagccccg cttcatcgcc atgggctacg 420 tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagccagagg atggagccgc 480 gggcgccgtg gatagagcag gagggtccgg agtattggga cggggagaca cggaaagtga 540 aggcccactc acagactcac cgagtggacc tggggaccct gcgcggctac tacaaccaga 600 gcgaggccgg tgagtgaccc cggcccgggg cgcaggtcac gacctctcat cccccacgga 660 cgggccaggt cgcccacagt ctccgggtcc gagatccgcc ccgaagccgc gggaccccga 720 gacccttgcc ccgggagagg cccaggcgcc tttacccggt ttcattttca gtttaggcca 780 aaaatccccc caggttggtc ggggcggggc ggggctcggg ggaccgggct gaccgcgggg 840 tccgggccag gttctcacac cgtccagagg atgtatggct gcgacgtggg gtcggactgg 900 cgcttcctcc gcgggtacca ccagtacgcc tacgacggca aggattacat cgccctgaaa 960 gaggacctgc gctcttggac cgcggcggac atggcagctc agaccaccaa gcacaagtgg 1020 gaggcggccc atgtggcgga gcagttgaga gcctacctgg agggcacgtg cgtggagtgg 1080 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacgggtac caggggccac 1140 ggggcgcctc cctgatcgcc tgtagatctc ccgggctggc ctcccacaag gaggggagac 1200 aattgggacc aacactagaa tatcgccctc cctctggtcc tgagggagag gaatcctcct 1260 gggtttccag atcctgtacc agagagtgac tctgaggttc cgccctgctc tctgacacaa 1320 ttaagggata aaatctctga aggaatgacg ggaagacgat ccctcgaata ctgatgagtg 1380 gttccctttg acacacacag gcagcagcct tgggcccgtg acttttcctc tcaggccttg 1440 ttctctgctt cacactcaat gtgtgtgggg gtctgagtcc agcacttctg agtccttcag 1500 cctccactca ggtcaggacc agaagtcgct gttccctctt cagggactag aattttccac 1560 ggaataggag attatcccag gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct 1620 tccccatccc aggtgtcctg tccattctca agatagccac atgtgtgctg gaggagtgtc 1680 ccatgacaga tgcaaaatgc ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg 1740 catatgactc accacgctgt ctctgaccat gaagccaccc tgaggtgctg ggccctgagc 1800 ttctaccctg cggagatcac actgacctgg cagcgggatg gggaggacca gacccaggac 1860 acggagctcg tggagaccag gcctgcaggg gatggaacct tccagaagtg ggcggctgtg 1920 gtggtgcctt ctggacagga gcagagatac acctgccatg tgcagcatga gggtttgccc 1980 aagcccctca ccctgagatg gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa 2040 agcaggagcc tctctgacct ttagcagggt cagggcccct caccttcccc tcttttccca 2100 gagccgtctt cccagcccac catccccatc gtgggcatca ttgctggcct ggttctcttt 2160 ggagctgtga tcactggagc tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt 2220 ggggaagggg tgaagggtgg gtctgagatt tcttgtctca ctgagggttc caagacccag 2280 gtagaagtgt gccctgcctc gttactggga agcaccaccc acaattatgg gcctacccag 2340 cctgggccct gtgtgccagc acttactctt ttgtaaagca cctgttaaaa tgaaggacag 2400 atttatcacc ttgattacag cggtgatggg acctgatccc agcagtcaca agtcacaggg 2460 gaaggtccct gaggaccttc aggagggcgg ttggtccagg acccacacct gctttcttca 2520 tgtttcctga tcccgccctg ggtctgcagt cacacatttc tggaaacttc tctgaggtcc 2580 aagacttgga ggttcctcta ggaccttaag gccctgactc ctttctggta tctcacagga 2640 cattttcttc ccacagatag aaaaggaggg agctactctc aggctgcaag taagtatgaa 2700 ggaggctgat gcctgaggtc cttgggatat tgtgtttggg agcccatggg ggagctcacc 2760 caccccacaa ttcctcctct agccacatct tctgtgggat ctgaccaggt tctgtttttg 2820 ttctacccca ggcagtgaca gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg 2880 tgagagcctg gagggcctga tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg 2940 ctatggggtt tctttccatt ggatgtattg agcatgcgat gggctgttta aagtgtgacc 3000 cctcactgtg acagatacga atttgttcat gaatattttt ttctatagtg tgagacagct 3060 gccttgtgtg ggactgagag gcaagagttg ttcctgccct tccctttgtg acttgaagaa 3120 ccctgacttt gtttc 3135 //