Dbfetch
ID KY419368; SV 1; linear; genomic DNA; STD; HUM; 3041 BP. XX AC KY419368; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens nonfunctional MHC class I antigen (HLA-B) gene, HLA-B*44:New DE allele, complete sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3041 RA Balz V., Krause S., Enzcmann J., Fischer J.; RT "Identification of three novel null-alleles and three splice-site variants RT of HLA class 1 genes in German Stem Cell Donor Registry and Terasaki RT samples"; RL Unpublished. XX RN [2] RP 1-3041 RA Balz V., Krause S., Enzcmann J., Fischer J.; RT ; RL Submitted (30-DEC-2016) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; a07cb0facf4c6123207e46263f578e04. DR IMGT/HLA; HLA-B*44:267N; HLA16747. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3041 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 154..2991 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /note="nonfunctional MHC class I antigen" FT exon 154..226 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=1 FT intron 227..355 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=1 FT exon 356..625 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=2 FT intron 626..868 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=2 FT exon 869..1144 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=3 FT intron 1145..1719 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=3 FT exon 1720..1996 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=4 FT variation 1726 FT /gene="HLA-B" FT /replace="cc" FT /note="compared to HLA-B*44:02:01:01 sequence this allele FT has an insertion of nucleotide C at position 1726 resulting FT in a frameshift" FT intron 1997..2089 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=4 FT exon 2090..2206 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=5 FT intron 2207..2647 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=5 FT exon 2648..2680 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=6 FT intron 2681..2786 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=6 FT exon 2787..2991 FT /gene="HLA-B" FT /allele="HLA-B*44:New" FT /number=7 XX SQ Sequence 3041 BP; 564 A; 877 C; 975 G; 625 T; 0 other; gtcgggtcct tcttccagga tactcgtgac gcgtccccat ttcccactcc cattgggtgt 60 cgggtgtcta gagaagccaa tcagtgtcgc cggggtccca gttctaaagt ccccacgcac 120 ccacccggac tcagaatctc ctcagacgcc gagatgcggg tcacggcgcc ccgaaccctc 180 ctcctgctgc tctggggggc agtggccctg accgagacct gggccggtga gtgcggggtc 240 gggagggaaa tggcctctgt ggggaggaga gaggggaccg caggcggggg cgcaggaccc 300 ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc 360 cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga gccccgcttc 420 atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga cgccacgagt 480 ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta ttgggaccgg 540 gagacacaga tctccaagac caacacacag acttaccgag agaacctgcg caccgcgctc 600 cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca ggtcacgact 660 ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga tccgcccccg 720 aggccgcggg acccgcccag accctcgacc ggcgagagcc ccaggcgcgt ttacccggtt 780 tcattttcag ttgaggccaa aatccccgcg ggttggtcgg ggcggggcgg ggctcggggg 840 acggggctga ccgcggggcc ggggccaggg tctcacatca tccagaggat gtacggctgc 900 gacgtggggc cggacgggcg cctcctccgc gggtatgacc aggacgccta cgacggcaag 960 gattacatcg ccctgaacga ggacctgagc tcctggaccg cggcggacac cgcggctcag 1020 atcacccagc gcaagtggga ggcggcccgt gtggcggagc aggacagagc ctacctggag 1080 ggcctgtgcg tggagtcgct ccgcagatac ctggagaacg ggaaggagac gctgcagcgc 1140 gcgggtacca ggggcagtgg ggagccttcc ccatctccta taggtcgccg gggatggcct 1200 cccacgagaa gaggaggaaa atgggatcag cgctagaatg tcgccctccc ttgaatggag 1260 aatggcatga gttttcctga gtttcctctg agggccccct cttctctcta ggacaattaa 1320 gggatgacgt ctctgaggaa atggagggga agacagtccc tagaatactg atcaggggtc 1380 ccctttgacc cctgcagcag ccttgggaac cgtgactttt cctctcaggc cttgttctct 1440 gcctcacact cagtgtgttt ggggctctga ttccagcact tctgagtcac tttacctcca 1500 ctcagatcag gagcagaagt ccctgttccc cgctcagaga ctcgaacttt ccaatgaata 1560 ggagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc ccttccccac 1620 cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt gtcccatgag 1680 agatgcaaag cgcctgaatt ttctgactct tcccatcaga cccccccaaa gacacatgtg 1740 acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct gggcttctac 1800 cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca ggacaccgag 1860 cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc tgtggtggtg 1920 ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct gccgaagccc 1980 ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc agggaaagca 2040 ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga gccgtcttcc 2100 cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc agttgtggtc 2160 atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2220 aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg tagaagtgtt 2280 ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct gggaccctgt 2340 gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat gtatcacctt 2400 ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa ggtccctgct 2460 aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc tcgtgtttcc 2520 tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc caagacgagg 2580 aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg gcattttctt 2640 cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg ggggcgggag 2700 tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc gggctctgac 2760 caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg atgtgtctct 2820 cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca ggtctggggg 2880 tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg atgtttcgcg 2940 tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat ttgttcatga 3000 ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg a 3041 //