Dbfetch
ID KY368786; SV 1; linear; genomic DNA; STD; HUM; 3335 BP. XX AC KY368786; XX DT 23-JUN-2017 (Rel. 133, Created) DT 24-FEB-2018 (Rel. 135, Last updated, Version 2) XX DE Homo sapiens isolate BY01378 MHC class I antigen (HLA-A) gene, DE HLA-A*02:20:01v allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC DOI: 10.1111/tan.13210 RP 1-3335 RX DOI; .1111/tan.13210. RX PUBMED; 29327506. RA Hurley C.K., Hou L., Lazaro A., Gerfen J., Enriquez E., Galarza P., RA Rodriguez Cardozo M.B., Halagan M., Maiers M., Behm D., Ng J.; RT "Next generation sequencing characterizes the extent of HLA diversity in an RT Argentinian registry population"; RL HLA. 91(3):175-186(2018). XX RN [2] RP 1-3335 RA Lazaro A.M., Hou L., Gerfen J., Hurley C.K.; RT ; RL Submitted (20-DEC-2016) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; 9b05750efa8908f50cbfa52146e48ac4. DR IMGT/HLA; HLA-A*02:20:01; HLA00026. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V1.7.0.2937 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3335 FT /organism="Homo sapiens" FT /isolate="BY01378" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <119..>3035 FT /gene="HLA-A" FT /allele="HLA-A*02:20:01v" FT mRNA join(<119..191,322..591,833..1108,1709..1984,2084..2200, FT 2639..2671,2814..2861,3031..>3035) FT /gene="HLA-A" FT /allele="HLA-A*02:20:01v" FT /product="MHC class I antigen" FT CDS join(119..191,322..591,833..1108,1709..1984,2084..2200, FT 2639..2671,2814..2861,3031..3035) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:20:01v" FT /product="MHC class I antigen" FT /db_xref="GOA:C5IWX9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C5IWX9" FT /protein_id="ASA47567.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRNVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3335 BP; 644 A; 957 C; 1010 G; 724 T; 0 other; ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcgtcgcggt 60 cgcggttcta aagtccgcac gcacccaccg ggactcagat tctccccaga cgccgaggat 120 ggccgtcatg gcgccccgaa ccctcgtcct gctactctcg ggggctctgg ccctgaccca 180 gacctgggcg ggtgagtgcg gggtcgggag ggaaacggcc tctgtgggga gaagcaacgg 240 gcccgcctgg cgggggcgca ggacccggga agccgcgccg ggaggagggt cgggcgggtc 300 tcagccactc ctcgtcccca ggctctcact ccatgaggta tttcttcaca tccgtgtccc 360 ggcccggccg cggggagccc cgcttcatcg cagtgggcta cgtggacgac acgcagttcg 420 tgcggttcga cagcgacgcc gcgagccaga ggatggagcc gcgggcgccg tggatagagc 480 aggagggtcc ggagtattgg gacggggaga cacggaatgt gaaggcccac tcacagactc 540 accgagtgga cctggggacc ctgcgcggct actacaacca gagcgaggcc ggtgagtgac 600 cccggcccgg ggcgcaggtc acgacctctc atcccccacg gacgggccag gtcgcccaca 660 gtctccgggt ccgagatccg ccccgaagcc gcgggacccc gagacccttg ccccgggaga 720 ggcccaggcg cctttacccg gtttcatttt cagtttaggc caaaaatccc cccaggttgg 780 tcggggcggg gcggggctcg ggggaccggg ctgaccgcgg ggtccgggcc aggttctcac 840 accgtccaga ggatgtatgg ctgcgacgtg gggtcggact ggcgcttcct ccgcgggtac 900 caccagtacg cctacgacgg caaggattac atcgccctga aagaggacct gcgctcttgg 960 accgcggcgg acatggcagc tcagaccacc aagcacaagt gggaggcggc ccatgtggcg 1020 gagcagttga gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag 1080 aacgggaagg agacgctgca gcgcacgggt accaggggcc acggggcgcc tccctgatcg 1140 cctgtagatc tcccgggctg gcctcccaca aggaggggag acaattggga ccaacactag 1200 aatatcgccc tccctctggt cctgagggag aggaatcctc ctgggtttcc agatcctgta 1260 ccagagagtg actctgaggt tccgccctgc tctctgacac aattaaggga taaaatctct 1320 gaaggaatga cgggaagacg atccctcgaa tactgatgag tggttccctt tgacacacac 1380 aggcagcagc cttgggcccg tgacttttcc tctcaggcct tgttctctgc ttcacactca 1440 atgtgtgtgg gggtctgagt ccagcacttc tgagtccttc agcctccact caggtcagga 1500 ccagaagtcg ctgttccctc ttcagggact agaattttcc acggaatagg agattatccc 1560 aggtgcctgt gtccaggctg gtgtctgggt tctgtgctcc cttccccatc ccaggtgtcc 1620 tgtccattct caagatagcc acatgtgtgc tggaggagtg tcccatgaca gatgcaaaat 1680 gcctgaatga tctgactctt cctgacagac gcccccaaaa cgcatatgac tcaccacgct 1740 gtctctgacc atgaagccac cctgaggtgc tgggccctga gcttctaccc tgcggagatc 1800 acactgacct ggcagcggga tggggaggac cagacccagg acacggagct cgtggagacc 1860 aggcctgcag gggatggaac cttccagaag tgggcggctg tggtggtgcc ttctggacag 1920 gagcagagat acacctgcca tgtgcagcat gagggtttgc ccaagcccct caccctgaga 1980 tggggtaagg agggagacgg gggtgtcatg tcttttaggg aaagcaggag cctctctgac 2040 ctttagcagg gtcagggccc ctcaccttcc cctcttttcc cagagccgtc ttcccagccc 2100 accatcccca tcgtgggcat cattgctggc ctggttctct ttggagctgt gatcactgga 2160 gctgtggtcg ctgctgtgat gtggaggagg aagagctcag gtggggaagg ggtgaagggt 2220 gggtctgaga tttcttgtct cactgagggt tccaagaccc aggtagaagt gtgccctgcc 2280 tcgttactgg gaagcaccac ccacaattat gggcctaccc agcctgggcc ctgtgtgcca 2340 gcacttactc ttttgtaaag cacctgttaa aatgaaggac agatttatca ccttgattac 2400 agcggtgatg ggacctgatc ccagcagtca caagtcacag gggaaggtcc ctgaggacct 2460 tcaggagggc ggttggtcca ggacccacac ctgctttctt catgtttcct gatcccgccc 2520 tgggtctgca gtcacacatt tctggaaact tctctgaggt ccaagacttg gaggttcctc 2580 taggacctta aggccctgac tcctttctgg tatctcacag gacattttct tcccacagat 2640 agaaaaggag ggagctactc tcaggctgca agtaagtatg aaggaggctg atgcctgagg 2700 tccttgggat attgtgtttg ggagcccatg ggggagctca cccaccccac aattcctcct 2760 ctagccacat cttctgtggg atctgaccag gttctgtttt tgttctaccc caggcagtga 2820 cagtgcccag ggctctgatg tgtctctcac agcttgtaaa ggtgagagcc tggagggcct 2880 gatgtgtgtt gggtgttggg cggaacagtg gacacagctg tgctatgggg tttctttcca 2940 ttggatgtat tgagcatgcg atgggctgtt taaagtgtga cccctcactg tgacagatac 3000 gaatttgttc atgaatattt ttttctatag tgtgagacag ctgccttgtg tgggactgag 3060 aggcaagagt tgttcctgcc cttccctttg tgacttgaag aaccctgact ttgtttctgc 3120 aaaggcacct gcatgtgtct gtgttcgtgt aggcataatg tgaggaggtg gggagaccac 3180 cccaccccca tgtccaccat gaccctcttc ccacgctgac ctgtgctccc tccccaatca 3240 tctttcctgt tccagagagg tggggctgag gtgtctccat ctctgtctca acttcatggt 3300 gcactgagct gtaacttctt ccttccctat taaaa 3335 //