Dbfetch
ID KX711700; SV 1; linear; genomic DNA; STD; HUM; 2978 BP. XX AC KX711700; XX DT 31-MAR-2017 (Rel. 132, Created) DT 31-MAR-2017 (Rel. 132, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*04:01:01:05v allele, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2978 RA Lazaro A.M., Hou L., Hurley C.K.; RT ; RL Submitted (16-AUG-2016) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; 3244e429da19fbea9279d1e06eda945e. DR EuropePMC; PMC5425813; 27976839. DR IMGT/HLA; HLA-C*04:01:01:05; HLA08080. XX CC ##Assembly-Data-START## CC Assembly Method :: ASSIGN MPS v. V10.0.792; GenDex v. CC V1.7.0.2937 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2978 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="RDP-CH5-37-" FT /db_xref="taxon:9606" FT gene <84..>2809 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:05v" FT mRNA join(<84..156,287..556,803..1078,1666..1941,2063..2182, FT 2622..2654,2762..>2809) FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:05v" FT /product="MHC class I antigen" FT CDS join(84..156,287..556,803..1078,1666..1941,2063..2182, FT 2622..2654,2762..>2809) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:05v" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A1V0EFI6" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1V0EFI6" FT /protein_id="ARB15861.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACK" XX SQ Sequence 2978 BP; 567 A; 859 C; 945 G; 607 T; 0 other; gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt ccccagtcac ccacccggac 60 tcagattctc cccagacgcc gagatgcggg tcatggcgcc ccgaaccctc atcctgctgc 120 tctcgggagc cctggccctg accgagacct gggccggtga gtgcggggtt gggagggaaa 180 cggcctctgg ggagaggagc gaggggcccg cccggcgagg gcgcaggacc cgggaagccg 240 cgcagggagg agggtcgggc gggtctcagc cactcctcgt ccccaggctc ccactccatg 300 aggtatttct ccacatccgt gtcctggccc ggccgcgggg agccccgctt catcgcagtg 360 ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg acgccgcgag tccaagaggg 420 gagccgcggg agccgtgggt ggagcaggag gggccggagt attgggaccg ggagacacag 480 aagtacaagc gccaggcaca ggctgaccga gtgaacctgc ggaaactgcg cggctactac 540 aaccagagcg aggacggtga gtgaccccgg cccggggcgc aggtcacgac ccctccccat 600 cccccacgga cggcccgggt cgccccgagt ctccccgtct gagatccacc ccgaggctgc 660 ggaacccgcc cagaccctcg accggagaga gccccagtca cctttacccg gtttcatttt 720 cagtttaggc caaaatcccc gcgggttggt cgggactggg gcggggctcg ggggaccggg 780 ctgaccacgg gggcggggcc agggtctcac accctccaga ggatgtttgg ctgcgacctg 840 gggccggacg ggcgcctcct ccgcgggtat aaccagttcg cctacgacgg caaggattac 900 atcgccctga acgaggatct gcgctcctgg accgccgcgg acacggcggc tcagatcacc 960 cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga gagcctacct ggagggcacg 1020 tgcgtggagt ggctccgcag atacctggag aacgggaagg agacgctgca gcgcgcgggt 1080 accaggggca gtggggagcc ttccccatct cccgtagatc tcccgggatg gcctcccacg 1140 aggaggggag gaaaatggga tcagcgctag aatatcgccc tcccttgaat ggagaatggg 1200 atgagttttc ctgagtttcc tctgagggcc ccctctgctc tctaggacaa ttaagggatg 1260 aagtccttga ggaaatggag gggaagacag tccctggaat actgatcagg ggtccccttt 1320 gaccactttg accactgcag cagctgtggt caggctgctg acctttctct caggccttgt 1380 tctctgcctg acgctcaatg tgtttgaagg tttgattcca gcttttctga gtccttcggc 1440 ctccactcag gtcaggacca gaagtcgctg ttcctccctc agagactaga actttccaat 1500 gaataggaga ttatcccagg tgcctgtgtc caggctggcg tctgggttct gtgccccctt 1560 ccccacccca ggtgtcctgt ccattctcag gatggtcaca tgggcgctgt tggagtgtcg 1620 caagagagat acaaagtgtc tgaattttct gactcttccc atcagaacac ccaaagacac 1680 acgtgaccca ccatcccgtc tctgaccatg aggccaccct gaggtgctgg gccctgggct 1740 tctaccctgc ggagatcaca ctgacctggc agtgggatgg ggaggaccaa actcaggaca 1800 ccgagcttgt ggagaccagg ccagcaggag atggaacctt ccagaagtgg gcagctgtgg 1860 tggtgccttc tggagaagag cagagataca cgtgccatgt tcagcacgag gggctgccgg 1920 agcccctcac cctgagatgg agtaaggagg gggatgaggg gtgatgtgtc ttctcaggga 1980 aagcagaagt cctggagccc ttcagccggg tcagggctga ggcttggagg tcagggcccc 2040 tcaccttccc ctcctttccc agagccgtct tcccagccca ccatccccat cgtgggcatc 2100 gttgctggcc tggctgtcct ggctgtccta gctgtcctag gagctatggt ggctgttgtg 2160 atgtgtagga ggaagagctc aggtagggaa ggggtgagga gtggggtctg ggttttcttg 2220 ttccactggg agtttcaagc cccaggtaga agtgtgcccc acctcgttac tggaagcacc 2280 atccacacat gggccatccc agcctgggac cctgtgtgcc agcacttact ctgttgtgaa 2340 gcacatgaca atgaaggaca gatgtatcac cttgatgatt atggtgttgg ggtccttgat 2400 tccagcattc atgagtcagg ggaaggtccc tgctaaggac agaccttagg agggcagttg 2460 cttcagaacc cacagctgct ttccccgtgt ttcctgatcc tgccctgggt ctgcagtcat 2520 agttctggaa acttctcttg ggtccaagac taggaggttc ccctaagatc gcatggccct 2580 gcctcctccc tgtcccctca cagggcattt tcttcccaca ggtggaaaag gagggagctg 2640 ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga ggagctcacc caccccataa 2700 ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc tttttttttg ttctacccca 2760 gccagcaaca gtgcccaggg ctctgatgag tctctcatcg cttgtaaagg tgagattctg 2820 gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc ctaggtaatg gggatccttt 2880 gattgggacg tttcgaatgt gtggtgagct gttcagagtg tcatcactta ccatgactga 2940 cctgaatttg ttcatgacta ttgtgttctg tagcctga 2978 //