Dbfetch
ID KX156616; SV 1; linear; genomic DNA; STD; HUM; 2722 BP.
XX
AC KX156616;
XX
DT 10-MAY-2017 (Rel. 132, Created)
DT 10-MAY-2017 (Rel. 132, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*18:xx new allele,
DE partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2722
RA Sidahmed A.M.E., Berka N.;
RT ;
RL Submitted (27-APR-2016) to the INSDC.
RL Pathology and Laboratory Medicine, University of Calgary and Calgary
RL Laboratory Service, 153 Aspenshire Dr Sw, Calgary, AB T3H 0p5, Canada
XX
DR MD5; 438897d3ac9c9efb53bde5edf1c187e7.
DR IMGT/HLA; HLA-B*18:124; HLA14946.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: PacBio RS II software v. April 2014
CC Sequencing Technology :: Illumina; Pacific Biosciences
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..2722
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <37..>2098
FT /gene="HLA-B"
FT /allele="HLA-B*18:xx new"
FT mRNA join(<37..109,238..507,754..1029,1602..1877,1982..>2098)
FT /gene="HLA-B"
FT /allele="HLA-B*18:xx new"
FT /product="MHC class I antigen"
FT CDS join(37..109,238..507,754..1029,1602..1877,1982..>2098)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*18:xx new"
FT /product="MHC class I antigen"
FT /note="human leukocyte antigen"
FT /db_xref="GOA:A0A1W5LVZ2"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A1W5LVZ2"
FT /protein_id="ANS71424.1"
FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR
FT FISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRN
FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGLYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSS"
XX
SQ Sequence 2722 BP; 507 A; 823 C; 858 G; 534 T; 0 other;
cacccacccg gactcagaat ctcctcagac gccgagatgc gggtcacggc gccccgaacc 60
ctcctcctgc tgctctgggg ggcagtggcc ctgaccgaga cctgggctgg tgagtgcggg 120
gtcggcaggg aaatggcctc tgtggggagg agcgagggga ccgcaggcgg gggcgcagga 180
cccggggagc cgcgccggga ggagggtcgg gcgggtctca gcccctcctt gccccaggct 240
cccactccat gaggtatttc cacacctccg tgtcccggcc cggccgcggg gagccccgct 300
tcatctcagt gggctacgtg gacggcaccc agttcgtgag gttcgacagc gacgccgcga 360
gtccgaggac ggagccccgg gcgccgtgga tagagcaaga ggggccggag tattgggacc 420
ggaacacaca gatctccaag accaacacac agacttaccg agagagcctg cggaacctgc 480
gcggctacta caaccagagc gaggccggtg agtgaccccg gcccggggcg caggtcacga 540
ctccccatcc cccacgtacg gcccgggtcg ccccgagtct ccgggtccga gatccgcccc 600
cctgaggccg cgggacccgc ccagaccctc gaccggcgag agccccaggc gcgtttaccc 660
ggtttcattt tcagttgagg ccaaaatccc cgcgggttgg tcggggcggg gcggggctcg 720
gggggacggg gctgaccgcg gggccggggc cagggtctca caccctccag aggatgtacg 780
gctgcgacgt ggggccggac gggcgcctcc tccgcgggca tgaccagtcc gcctacgacg 840
gcaaggatta catcgccctg aacgaggacc tgagctcctg gaccgcggcg gacaccgcgg 900
ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc ggagcagctg agagcctacc 960
tggagggcac gtgcgtggag tggctccgca gacacctgga gaacgggaag gagacgctgc 1020
agcgcgcggg taccaggggc agtggggagc cttccccatc tcctataggt cgccggggat 1080
ggcctcccac gagaagagga ggaaaatggg atcagcgcta gaatgtcgcc ctcccttgaa 1140
tggagaatgg catgagtttt cccgagtttc ctctgagggc cccctcttct ctctaggaca 1200
attaagggat gacgtctctg aggaaatgga ggggaagaca gtccctagaa tactgatcag 1260
gggtcccctt tgacccctgc agcagccttg ggaaccatga cttttcctct caggccttgt 1320
tctctgcctc acactcagtg tgtttggggc tctgattcca gcacttctga gtcactttac 1380
ctccactcag atcaggagca gaagtctctg ttccccgctc agagactcga actttccaat 1440
gaatagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg ccccttcccc 1500
accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg gtgtcccatg 1560
agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa agacacatgt 1620
gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc tgggcctcta 1680
ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc aggacaccga 1740
gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag ctgtggtggt 1800
gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc tgccgaagcc 1860
cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct cagggaaagc 1920
aggagccctt ctggagccct tcagcagggt cagggcccct catcttcccc tcctttccca 1980
gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct ggctgtccta 2040
gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa gagctcaggt 2100
agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt tcaagcccca 2160
ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg ctaacgcagc 2220
ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa tgaaggacgg 2280
atgtatcacc ttgatggttg tggtgttggg gtcctgattc cagcattcat gagtcagggg 2340
aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca cacttgcttt 2400
cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat tccttttggt 2460
tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag tcccctcaca 2520
ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc gtgtaagtgg 2580
tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc cacgtctcct 2640
gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg cccagggctc 2700
tgatgtgtct ctcacagctt ga 2722
//