Dbfetch
ID KU641694; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC KU641694; XX DT 02-AUG-2016 (Rel. 129, Created) DT 02-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens clone 0271210542 MHC class I antigen (HLA-B) gene, DE HLA-B-B*40:01 new allele, exons 2 through 4 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA Qiang W.; RT "A HLA novel allele identified by sequence-based typing in a Chinese RT individual"; RL Unpublished. XX RN [2] RP 1-1022 RA Qiang W.; RT ; RL Submitted (18-JAN-2016) to the INSDC. RL HLA Typing Laboratory, Wuhan Blood Centre, Baofeng First Road 8, Wuhan, RL Hubei Province 430030, China XX DR MD5; 30519578afde0944bec13eb64a5b9240. DR IMGT/HLA; HLA-B*40:01:47; HLA14696. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="0271210542" FT /db_xref="taxon:9606" FT gene <1..>1022 FT /gene="HLA-B" FT /allele="B*40:01 new" FT mRNA join(<1..270,371..646,747..>1022) FT /gene="HLA-B" FT /allele="B*40:01 new" FT /product="MHC class I antigen" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-B" FT /allele="B*40:01 new" FT /product="MHC class I antigen" FT /note="human leukocyte antigen" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1B1UZB6" FT /protein_id="ANW09563.1" FT /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE FT PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYGCDVGP FT DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAYLEGEC FT VEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW" FT exon 1..270 FT /gene="HLA-B" FT /allele="B*40:01 new" FT /number=2 FT gap 271..370 FT /estimated_length=unknown FT exon 371..646 FT /gene="HLA-B" FT /allele="B*40:01 new" FT /number=3 FT gap 647..746 FT /estimated_length=unknown FT exon 747..1022 FT /gene="HLA-B" FT /allele="B*40:01 new" FT /number=4 XX SQ Sequence 1022 BP; 181 A; 254 C; 271 G; 116 T; 200 other; gctcccactc catgaggtat ttccacaccg ccatgtcccg gcccggccgc ggggagcccc 60 gcttcatcac cgtgggctac gtggacgaca cgctgttcgt gaggttcgac agcgacgcca 120 cgagtccgag gaaggagccg cgggcgccat ggatagagca ggaggggccg gagtattggg 180 accgggagac acagatctcc aagaccaaca cacagactta ccgagagagc ctgcggaacc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacac cctccagagg atgtacggct gcgacgtggg gccggacggg 420 cgcctcctcc gcgggcataa ccagtatgcc tacgacggca aggattacat cgccctgaac 480 gaggacctgc gctcctggac cgccgcggac acggcggctc agatctccca gcgcaagttg 540 gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcgagtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggac aagctggagc gcgctgnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccat 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggt ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900 accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960 gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020 gg 1022 //