Dbfetch
ID KU528606; SV 1; linear; genomic DNA; STD; HUM; 2895 BP. XX AC KU528606; XX DT 02-APR-2016 (Rel. 128, Created) DT 02-APR-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*14:NEW allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2895 RA Bravo-Egana V., Clark P., Monos D.; RT "Generation of high confidence HLA genotyping and consensus sequences for RT Class I HLA loci using the NGS-based Omixon Holotype HLA typing system and RT the Illumina MiSeq platform"; RL Unpublished. XX RN [2] RP 1-2895 RA Bravo-Egana V., Clark P., Monos D.; RT ; RL Submitted (16-DEC-2015) to the INSDC. RL Immunogenetics Laboratory, Children's Hospital of Philadelphia, 3516 Civic RL Center Blvd. Abramson Bldg. Room 712, Philadelphia, PA 19104, USA XX DR MD5; 132272a482dfe52706cabe423b060473. DR IMGT/HLA; HLA-C*14:02:01:02; HLA14811. XX CC ##Assembly-Data-START## CC Assembly Method :: Omixon Twin v. 1.1.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2895 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>2895 FT /gene="HLA-C" FT /allele="HLA-C*14:NEW" FT mRNA join(<1..73,204..473,720..995,1583..1858,1980..2099, FT 2539..2571,2679..2726,2891..>2895) FT /gene="HLA-C" FT /allele="HLA-C*14:NEW" FT /product="MHC class I antigen" FT CDS join(1..73,204..473,720..995,1583..1858,1980..2099, FT 2539..2571,2679..2726,2891..2895) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*14:NEW" FT /product="MHC class I antigen" FT /db_xref="GOA:C1K0Y4" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C1K0Y4" FT /protein_id="ALZ40821.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFSTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMFGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 2895 BP; 537 A; 834 C; 930 G; 594 T; 0 other; atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60 gagacctggg cctgtgagtg cggggttagg agggaaacgg cctctgcgga gaggagcgag 120 gggcccgccc ggcgagggcg caggacccgg ggagccgcgc agggaggagg gtcgggcggg 180 tctcagccac tcctcgtccc caggctccca ctccatgagg tatttctcca catccgtgtc 240 ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt 300 cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga 360 gcaggagggg ccggagtatt gggaccggga gacacagaag tacaagcgcc aggcacagac 420 tgaccgagtg agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg 480 accccggccc ggggcgcagg tcacgacccc tccccatccc ccacggacgg cccgggtcgc 540 cccgagtctc cccgtctgag atccaccccg aggctgcgga acccgcccag accctcgacc 600 ggagagagcc ccagtcacct ttacccggtt tcattttcag tttaggccaa aatccccgcg 660 ggttggtcgg gactggggcg gggctcgggg gacggggctg accacggggg cggggccagg 720 gtctcacacc ctccagtgga tgtttggctg cgacctgggg cccgacgggc gcctcctccg 780 cgggtatgac cagtccgcct acgacggcaa ggattacatc gccctgaacg aggatctgcg 840 ctcctggacc gccgcggaca cggcggctca gatcacccag cgcaagtggg aggcggcccg 900 tgaggcggag cagcggagag cctacctgga gggcacgtgc gtggagtggc tccgcagata 960 cctggagaac gggaaggaga cgctgcagcg cgcgggtacc aggggcagtg gggagccttc 1020 cccatctccc gtagatctcc cgggatggcc tcccacgagg aggggaggaa aatgggatca 1080 gcgctagaat atcgccctcc cttgaatgga gaatggcatg agttttcctg agtttcctct 1140 gagggccccc tctgctctct aggacaatta agggatgaag tccttgagga aatggagggg 1200 aagacagtcc ctggaatact gatcaggggt cccctttgac cactttgacc actgcagcag 1260 ctgtggtcag gctgctgacc tttctctcag gccttgttct ctgcctcacg ctcaatgtgt 1320 ttgaaggttt gattccagct tttctgagtc cttcggcctc cactcaggtc aggaccagaa 1380 gtcgctgttc ctccctcaga gactagaact ttccaatgaa taggagatta tcccaggtgc 1440 ctgtgtccag gctggcgtct gggttctgtg cccccttccc caccccaggt gtcctgtcca 1500 ttctcaggat ggtcacatgg gcgctgttgg agtgtcgcaa gagagataca aagtgtctga 1560 attttctgac tcttcccgtc agaacaccca aagacacacg tgacccacca tcccgtctct 1620 gaccatgagg ccaccctgag gtgctgggcc ctgggcttct accctgcgga gatcacactg 1680 acctggcagt gggatgggga ggaccaaact caggacaccg agcttgtgga gaccaggcca 1740 gcaggagatg gaaccttcca gaagtgggca gctgtggtgg tgccttctgg agaagagcag 1800 agatacacgt gccatgtgca gcacgagggg ctgccggagc ccctcaccct gagatggggt 1860 aaggaggggg atgaggggtg atgtgtcttc tcagggaaag cagaagtcct ggagcccttc 1920 agccgggtca gggctgaggc ttggaggtca gggcccctca ccttcccctc ctttcccaga 1980 gccgtcttcc cagcccacca tccccatcgt gggcatcgtt gctggcctgg ctgtcctggc 2040 tgtcctagct gtcctaggag ctgtggtggc tgttgtgatg tgtaggagga agagctcagg 2100 tagggaaggt gtgaggagtg gggtctgggt tttcttgttc cactgggagt ttcaagcccc 2160 aggtagaagt gtgccccacc tcgttactgg aagcaccatc cacacatggg ccatcccagc 2220 ctgggaccct gtgtgccagc acttactctg ttgtgaagca catgacaatg aaggacagat 2280 gtatcacctt gatgattatg gtgttggggt ccttgattcc agcattcatg agtcagggga 2340 aggtccctgc taaggacaga ccttaggagg gcagttgctt caggacccac agctgctttc 2400 cccgtgtttc ctgatcctgc cctgggtctg cagtcatagt tctggaaact tctcttgggt 2460 ccaagactag gaggttcccc taagatcgca tggccctgcc tcctccctgt cccctcacag 2520 ggcattttct tcccacaggt ggaaaaggag ggagctgctc tcaggctgcg tgtaagtgat 2580 ggcggtgggc gtgtggagga gctcacccac cccataattc ctcttgtccc acatctcctg 2640 cgggctctga ccaggtcttt ttttttgttc taccccagcc agcaacagtg cccagggctc 2700 tgatgagtct ctcatcgctt gtaaaggtga gattctgggg agctgaagtg gtcgggggtg 2760 gggcagaggg aaaaggcctg ggtaatgggg atcctttgat tgggacgttt cgaatgtgtg 2820 gtgagctgtt cagagtgtca tcacttacca tgactgacct gaatttgttc atgactattg 2880 tgttctgtag cctga 2895 //