Dbfetch
ID KU324538; SV 1; linear; genomic DNA; STD; HUM; 3332 BP. XX AC KU324538; XX DT 17-JUN-2016 (Rel. 129, Created) DT 17-JUN-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens isolate NT01318 MHC class I antigen (HLA-B) gene, HLA-B*56:04 DE variant allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3332 RA Lazaro A.M., Tu B., Hou L., Hurley C.K.; RT "Novel HLA class I allele"; RL Unpublished. XX RN [2] RP 1-3332 RA Lazaro A.M., Tu B., Hou L., Hurley C.K.; RT ; RL Submitted (22-DEC-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; f8f319496f257cacd5f8e1fb5e43be9e. DR IMGT/HLA; HLA-B*56:02:02; HLA14399. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. 1.0.0.792; GenDex v. CC 1.9.3.4077 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3332 FT /organism="Homo sapiens" FT /isolate="NT01318" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <285..>2972 FT /gene="HLA-B" FT /allele="HLA-B*56:04 variant" FT mRNA join(<285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..>2972) FT /gene="HLA-B" FT /allele="HLA-B*56:04 variant" FT /product="MHC class I antigen" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*56:04 variant" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A142J2H0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A142J2H0" FT /protein_id="ANJ46019.1" FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 3332 BP; 616 A; 967 C; 1052 G; 697 T; 0 other; gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac cctccagagg 1020 atgtacggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaaatgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2220 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460 ctaatgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2700 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggcggggggg ggtggggtgg ggagggggca gaggggaaag gcctgggtaa tggagattct 3060 ttgattggga tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact 3120 aaccagaatt tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga 3180 ctgagatgca ggatttcttc actcctcccc tttgtgactt caagagcctc tggcatctct 3240 ttctgcaaag gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga 3300 gacagcccac ccccgtgtcc actgtgaccc ct 3332 //