Dbfetch
ID KU319245; SV 1; linear; genomic DNA; STD; HUM; 4081 BP. XX AC KU319245; XX DT 27-MAY-2016 (Rel. 128, Created) DT 27-MAY-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*15_18_01v1 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4081 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-4081 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez Vina M.A.; RT ; RL Submitted (18-DEC-2015) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 07d2ef525968e772dcee90b230dd1190. DR IMGT/HLA; HLA-B*15:18:01:02; HLA14853. XX CC ##Assembly-Data-START## CC Assembly Method :: Program in house v. k1.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4081 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <270..>2958 FT /gene="HLA-B" FT /allele="HLA-B*15_18_01v1" FT mRNA join(<270..342,472..741,987..1262,1838..2113,2218..2334, FT 2776..2808,2915..>2958) FT /gene="HLA-B" FT /allele="HLA-B*15_18_01v1" FT /product="MHC class I antigen" FT CDS join(270..342,472..741,987..1262,1838..2113,2218..2334, FT 2776..2808,2915..2958) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15_18_01v1" FT /product="MHC class I antigen" FT /db_xref="GOA:Q95346" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q95346" FT /protein_id="ANG08661.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 4081 BP; 767 A; 1146 C; 1237 G; 931 T; 0 other; ccaggtcccg gacggggctc tcagggtctc aggctccgag agccttgtct gcattgggga 60 ggcgcagcgt tggggattcc ccactcccac gagtttcact tcttctccca acctatgtcg 120 ggtccttctt ccaggatact cgtgacgcgt ccccatttcc cactcccatt gggtgtcggg 180 tgtctagaga agccaatcag tgtcgccggg gtcccagttc taaagtcccc acgcacccac 240 ccggactcaa aatctcctca gacgccgaga tgcgggtcac ggcgccccga accgtcctcc 300 tgctgctctc gggagccctg gccctgaccg agacctgggc cggtgagtgc ggggtcggca 360 gggaaatggc ctctgtgggg aggagcgagg ggaccgcagg cgggggcgca ggacccgggg 420 agccgcgccg ggaggagggt cgggcgggtc tcagcccctc ctcgccccca ggctcccact 480 ccatgaggta tttctacacc gccatgtccc ggcccggccg cggggagccc cgcttcatct 540 cagtgggcta cgtggacgac acgcagttcg tgaggttcga cagcgacgcc gcgagtccga 600 gagaggagcc gcgggcgccg tggatagagc aggaggggcc ggagtattgg gaccggaaca 660 cacagatctg caagaccaac acacagactt accgagagag cctgcggaac ctgcgcggct 720 actacaacca gagcgaggcc ggtgagtgac cccggcctgg ggcgcaggtc acgactcccc 780 atcccccacg tacggcccgg gtcgccccga gtctccgggt ccgagatccg cccccctgag 840 gccgcgggac ccgcccaaac cctcgaccgg cgagagcccc aggcgcgttt acccggtttc 900 attttcagtt gaggccaaaa tccccgcggg ttggtcgggg cggggcgggg ctcgggggac 960 ggggctgacc gcggggcctg ggccagggtc tcacaccctc cagaggatgt acggctgcga 1020 cgtggggccg gacgggcgcc tcctccgcgg gcatgaccag tccgcctacg acggcaagga 1080 ttacatcgcc ctgaacgagg acctgagctc ctggaccgcg gcggacacgg cggctcagat 1140 cacccagcgc aagtgggagg cggcccgtga ggcggagcag ctgagagcct acctggaggg 1200 cctgtgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc tgcagcgcgc 1260 gggtaccagg ggcagtgggg agccttcccc atctcctata ggtcgccggg gatggcctcc 1320 cacgagaaga ggaggaaaat gggatcagcg ctagaatgtc gccctccctt gaatggagaa 1380 tggcatgagt tttcctgagt ttcctctgag ggccccctct tctctctagg acaattaagg 1440 gatgacgtct ctgaggaaat ggaggggaag acagtcccta ggatagtgat caggggtccc 1500 ctttgacccc tgcagcagcc ttgggaaccg tgacttttcc tctcaggcct tgttctctgc 1560 ctcacactca gtgtgtttgg ggctctgatt ccagcacttc tgagtcactt tacctccact 1620 cagatcagga gcagaagtcc ctgttccccg ctcagagact cgaactttcc aatgaatagg 1680 agattatccc aggtgcctgc gtccaggctg gtgtctgggt tctgtgcccc ttccccaccc 1740 caggtgtcct gtccattctc aggctggtca catgggtggt cctagggtgt cccatgagag 1800 atgcaaagcg cctgaatttt ctgactcttc ccatcagacc ccccaaagac acatgtgacc 1860 caccacccca tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 1920 gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga caccgagctt 1980 gtggagacca gaccagcagg agatagaacc ttccagaagt gggcagctgt ggtggtgcct 2040 tctggagaag agcagagata cacatgccat gtacagcatg aggggctgcc gaagcccctc 2100 accctgagat ggggtaagga gggggatgag gggtcatatc tgttctcagg gaaagcagga 2160 gcccttctgg agcccttcag cagggtcagg gcccctcatc ttcccctcct ttcccagagc 2220 catcttccca gtccaccatc cccatcgtgg gcattgttgc tggcctggct gtcctagcag 2280 ttgtggtcat cggagctgtg gtcgctactg tgatgtgtag gaggaagagc tcaggtaggg 2340 aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa gccccaggta 2400 gaagtgttcc ctgcctcatt actgggaagc agcatccaca caggggctaa cgcagcctgg 2460 gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa ggacagatgt 2520 atcgccttga tggttgtggt gttggggtcc tgattccagc attcatgagt caggggaagg 2580 tccctgctaa ggacagacct taggagggca gttggtccag gacccacact tgctttcctc 2640 gtgtttcctg atcctgccct gggtctgtag tcatacttct ggaaattcct tttggttcca 2700 agacgaggag gttcctctaa gatctcatgg tcctgcttcc tcccagtccc ctcacaggac 2760 attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt aagtggtggg 2820 ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg tctcctgcgg 2880 gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca gggctctgat 2940 gtgtctctca cagcttgaaa aggtgagatt cttggggtct agagtgggtg gggtggcggg 3000 tctgggggtg ggtggggcag tggggaaagg cctgggtaat ggagattctt tgattgggat 3060 gtttcgcgtg tgtcgtgggc tgttcagagt gtcatcactt accatgacta accagaattt 3120 gttcatgact gttgttttct gtagcctgag acagctgtct tgtgagggac tgagatgcag 3180 gatttcttca cgcctcccct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3240 cacctgaatg tgtctgcgtc cctgttagca taatgtgagg aggtggagag acagcccacc 3300 cttgtgtcca ctgtgacccc tgttcccatg ctgatctgtg tttcctcccc agtcatcttt 3360 cttgttccag agaggtgggg ctggatgtct ccatctctgt ctcaacttta tgtgcactga 3420 gctgcaactt cttacttccc tactgaaaat aagaatctga atataaattt gttttctcaa 3480 atatttgcta tgagaggttg atggattaat taaataagtc aattcctgga atttgaaaga 3540 gcaaataaag acctgagaac cttccagaat ctgcatgttc gctgtgctga gtctgttgca 3600 ggtggggtgt ggagaaggct gtggggggcc gagtgtggat ggggcctgtg cccatttggt 3660 gttgagtcca tcatgggctt tatgtggtta gtcgtcagct gggtcacctt cactgctcca 3720 ttgtccttgt cccttcagtg gaaacttgtc cagtgggagc tgtgaccaca gaggctcaca 3780 catcgcccag ggcggcccct gcacacgggg atctctgtgc attctgagac aaattttcag 3840 agccattcac ctcctgccct gcttctagag ctccttttct gctctgctct tctgccctct 3900 ctccctgccc tggttctagt gatcttggtg ctgaatccaa tcccaactca tgaatctgta 3960 aagcagagtc taatttagac ttacatttgt ctgtgaaatt ggacccatca tcaaggactg 4020 ttctttcctg aagggagaac ctgattgtgt gctgcagtgt gctggggcag ggggtgcggg 4080 g 4081 //