Dbfetch
ID KU201527; SV 1; linear; genomic DNA; STD; HUM; 4209 BP. XX AC KU201527; XX DT 01-APR-2016 (Rel. 128, Created) DT 01-APR-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens isolate BY01298 MHC class II antigen (HLA-DQB1) gene, DE HLA-DQB1*06:77N allele, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4209 RA Lazaro A.M., Hou L., Hurley C.K.; RT "Novel HLA class II allele"; RL Unpublished. XX RN [2] RP 1-4209 RA Lazaro A.M., Hou L., Hurley C.K.; RT ; RL Submitted (30-NOV-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; d49b2c710d04b1d0ae8ae742a11f78fe. DR IMGT/HLA; HLA-DQB1*06:77N; HLA09375. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. 1.0.0.792; GenDex v. CC 1.9.3.4077 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4209 FT /organism="Homo sapiens" FT /isolate="BY01298" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>4209 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:77N" FT /note="MHC class II antigen; null allele; by1298 variant" XX SQ Sequence 4209 BP; 1082 A; 954 C; 983 G; 1190 T; 0 other; aggatttcgt gttccagttt aagggcatgt gctacttcac caacgggacg gagcgcgtgc 60 gtcttgtgac cagatacatc tataaccgag aggagtacgc gcgcttcgac agcgacgtgg 120 gggtgtaccg cgcggtgacg ccgtaggggc ggcctgatgc cgagtactgg aacagccaga 180 aggaagtcct ggaggggacc cgggcggagt tggacacggt gtgcagacac aactacgagg 240 tggcgttccg cgggatcttg cagaggagag gtgagcgtcg tcgcccctcc gtgaggccca 300 cccttggccg agaccccgag tttctgtgcc gggaggggcg atgggggcga ggtctctgaa 360 atctgagccc agttcattcc accccagggg aaaggaggcg gcggcggggt ggtgggggca 420 ggtgcatcgg aggggcgggg acctagggca gagcaggggg acaagcagag ttggccaggc 480 tgcctagtgt cccccccagc ctccccgtcc gtcggcctcg tcctccgctc tgcacgtttc 540 tcgcctcgtg ccttatgtgt ttgcctcctc gtaccttacc ttcgctaagc agttctctct 600 gcccccagtg cccaccctct tcccctgccc gccggcctcg ctagcactgc cccacccagc 660 aaggcccacg tgcgcagctt gcgccgcagg aagcttcagg cttggcctgg tggagttagg 720 gctgccccac agctgcgcgc agggcatcca gcaattacag ttgcgaaata agatattttg 780 actttttggc ttcaaatcat tattcatcgt aattctgttt tcttaaatgg ctaccactaa 840 tggcggagat ctttgaggcg agagactgtt taattattgc atgcctggta cctgacacat 900 tgactggtat gtggtgtgag ctcaatgatc ttctgttaaa ttcatgaata aatgtactca 960 gctgccaatc cagttaggtt caagaaaaaa acagaggctt acaaatgaac tttatcaatt 1020 attttctaac attttgctta atgctttcaa gtaaactctt actgacttgg atcttaatag 1080 aatttgtgaa tacaaagtct gaggaaaatg tgtttgctaa aaataaaaac aatgcttgaa 1140 tgatgttgta aggcagagtt ttaatttctt agaaaagctg aacaaatagc actatgcaaa 1200 gatcagaagt ttgggaataa ataggttgaa gctattaaat tattggataa aaatagtttc 1260 aggttgcttt tggcctaggt tatcccctcc cccccatcac tatccacttc aggaataaac 1320 attctgaaag tcaattttac ccattcagga agcacttatt tctagacagt tgccttatca 1380 aataccatct atgttatgtc atttaatctc acagctacct gtgcattaga gattagcatc 1440 accactttat atatcctaat attggtacat gataaacact ttaagtaatc agcccacaat 1500 tactcaccaa gatcttaagc ctcccaaagt acacaacatt cttatgttcc tcactacaca 1560 tatgtagagt ctaagggatg taaggccttg ttaaagccag ttttgaccag aagcagcaat 1620 gagtctattc ctgtttgttc tgtgtgttaa tgcggcattg aaaattcatg attaatcaat 1680 ccctagtctg accccggtgt tatctatgca ggttcacaaa acttttagtt tgctttacac 1740 tcccttgcct tcttttgact cacatcctaa tgccagcaag tacttatatt tttgctattt 1800 cagttttatt tccataaaat ttattttatc atcttttctc ataaatttgt gccctctatt 1860 tttactccca gtctgttgaa gatgaacaaa tcttataagg ccacatagct gactctgatt 1920 tcagttggcc tccaggaagg agaacctaaa gaaaagttca agtccaagca gaaaccatga 1980 ttccttccgg atgatggctc aagagtgcca tttaattggg gtgccacctg ctgacctcag 2040 caaatcccag ttatatgtat atgttcacat tacaggctca ttagcccagg ccgacctctg 2100 cacggatctc agaatatttt ctgtggagaa catacacgat aatgtctgat ttcagaacaa 2160 gaaagtaatt gtcaatagca aggaaatgga gtagggtaga cagctagtaa ttaaactcac 2220 ttgtgcgtta aaaagaaatt aaggaaaaaa agaaaatgag agaacatatt actaaataaa 2280 gaaagcacac attaaatatt tgctatagtt tcacactaag agaataaagg aaatgtgata 2340 aagtggccta aaaggaaagg atgagatgtg taaaagaggc ggggaaagat gtgtcatttt 2400 ttttactatg agcagcaatc tgagaagata aaggaattga gttgtggaca aacatgatgt 2460 ttgatcaagg gttatttgtt ttgaaggcct gcctactttt ttttcaaata ttacaaactt 2520 ttgaaataac attctacttt tttttcaaat attacaaact tttgaaataa cattcttttt 2580 gttttttgct gtctgttact agattgcaca ttctataaat gcagggacca tagtatgtta 2640 tttatctttg aattctcagt gattgtcaaa tttatatttg ttgaatgaac cttaatccaa 2700 gacttcgact ccaggtatct ttccactctg gtccaaggag ggatccttcc tcatggtaga 2760 cgtggtgtgt gttctcacat ctcactccta tgtcttttcc tgtctgttac tgccctcagt 2820 ggagcccaca gtgaccatct ccccatccag gacagaggcc ctcaaccacc acaacctgct 2880 ggtctgctcg gtgacagatt tctatccagg ccagatcaaa gtccggtggt ttcggaatga 2940 tcaggaggag acagccggcg ttgtgtccac cccccttatt aggaatggtg actggacttt 3000 ccagatcctg gtgatgctgg aaatgactcc ccagcgtgga gatgtctaca cctgccacgt 3060 ggagcacccc agcctccaga gccccatcac cgtggagtgg cgtaagggga tattgagttt 3120 ctgttactat gggcccacaa gacaaagagc tccttctgac ccattccttc ccatctctta 3180 tccctgatgt cactactgag ctgggaatca caggagacta gagcacctct tgctccatgg 3240 caagtgcatc agaagaatcc tggtctcatc acctttccag atgctaggga aattactcta 3300 catactgttg ctctgaatcc cagtcctgat agctctgagg gactgattct tagggctggt 3360 gactgggatc ttagggtcta aggttatgga tgagttcttg aagagcagag atttgcttcc 3420 ccactctctc acctattcac tgtatccaag gacctattgg ctggtctttc ccctccttag 3480 gggtggtctg aatggagaac taggttcctt tgatgccttc accttctgca cctcagactg 3540 gacttcaact cctcagcagg gatgctatgg ggtgtgggga caaacacaga cactcagttc 3600 tgctctttag gggctcagtc tgaatctgcc cagagcaaga tgctgagtgg cgttggaggc 3660 ttcgtgctgg ggctgatctt ccttgggctg ggccttatca tccgtcaaag gagtcagaaa 3720 ggtgaggaac cccaggggaa aaggggaaga tgggctgtga cccagaccct ctgttcagag 3780 tggtcctgtc tgtagattag ctctttcctc ctgaccctga gaagaagtgc gaggagacag 3840 gacaagatgg gaggaggcat tggaatctga ttttactggt tgaaaggtag cgctgtcaca 3900 gagctgactg atagagctta ttccagggca tccttaccat tcatcattgt ctcactggct 3960 cctttccaaa agcttcctcc attaagaggg tcagagcctc agcttccttt ctttctagtg 4020 acaatttcct ttgttttagg ggattttaaa ttagggtgct gaaggcctgg aagaacatgg 4080 gtgggaagag aatgtaactc taagtcatgt gtgtcatttt cctttggggt gagagagtgg 4140 ctgtttgtgt aatgagacct ttctctgcat aacttccttt tgtaagacct caagggcctc 4200 caccagcag 4209 //