Dbfetch

ID   KT957437; SV 1; linear; genomic DNA; STD; HUM; 3114 BP.
XX
AC   KT957437;
XX
DT   01-APR-2016 (Rel. 128, Created)
DT   01-APR-2016 (Rel. 128, Last updated, Version 1)
XX
DE   Homo sapiens isolate NT01290a MHC class I antigen (HLA-A) gene,
DE   HLA-A*02:06:01:03 variant allele, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-3114
RA   Lazaro A.M., Hou L., Hurley C.K.;
RT   "Novel HLA class I alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-3114
RA   Lazaro A.M., Hou L., Hurley C.K.;
RT   ;
RL   Submitted (23-OCT-2015) to the INSDC.
RL   Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL   20057, USA
XX
DR   MD5; 91b6f592d07d12c472077588e86fc588.
DR   IMGT/HLA; HLA-A*02:06:01:03; HLA14087.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Assign MPS v. 1.0.0.792; GenDex v.
CC                            1.9.3.4077
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3114
FT                   /organism="Homo sapiens"
FT                   /isolate="NT01290a"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <122..>2864
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:06:01:03 variant"
FT   mRNA            join(<122..194,325..594,836..1111,1712..1987,2087..2203,
FT                   2642..2674,2817..>2864)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:06:01:03 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(122..194,325..594,836..1111,1712..1987,2087..2203,
FT                   2642..2674,2817..>2864)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:06:01:03 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:A0A142J2B6"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:A0A142J2B6"
FT                   /protein_id="AMR70931.1"
FT                   /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
FT                   LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA
FT                   AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT                   GGSYSQAASSDSAQGSDVSLTACK"
XX
SQ   Sequence 3114 BP; 605 A; 889 C; 961 G; 659 T; 0 other;
     gacccagttc tcactcccat tgggtgtcgg gtttccagag aagccaatca gtgtcgtcgc        60
     ggtcgcggtt ctaaagtccg cacgcaccca ccgggactca gattctcccc agacgccgag       120
     gatggccgtc atggcgcccc gaaccctcgt cctgctactc tcgggggctc tggccctgac       180
     ccagacctgg gcgggtgagt gcggggtcgg gagggaaacg gcctctgtgg ggagaagcaa       240
     cgggcccgcc tggcgggggc gcaggacccg ggaagccgcg ccgggaggag ggtcgggcgg       300
     gtctcagcca ctcctcgtcc ccaggctctc actccatgag gtatttctac acctccgtgt       360
     cccggcccgg ccgcggggag ccccgcttca tcgcagtggg ctacgtggac gacacgcagt       420
     tcgtgcggtt cgacagcgac gccgcgagcc agaggatgga gccgcgggcg ccgtggatag       480
     agcaggaggg tccggagtat tgggacgggg agacacggaa agtgaaggcc cactcacaga       540
     ctcaccgagt ggacctgggg accctgcgcg gctactacaa ccagagcgag gccggtgagt       600
     gaccccggcc cggggcgcag gtcacgacct ctcatccccc acggacgggc caggtcgccc       660
     acagtctccg ggtccgagat ccgccccgaa gccgcgggac cccgagaccc ttgccccggg       720
     agaggcccag gtgcctttac ccggtttcat tttcagttta ggccaaaaat ccccccaggt       780
     tggtcggggc ggggcggggc tcgggggacc gggctgaccg cggggtccgg gccaggttct       840
     cacaccgtcc agaggatgta tggctgcgac gtggggtcgg actggcgctt cctccgcggg       900
     taccaccagt acgcctacga cggcaaggat tacatcgccc tgaaagagga cctgcgctct       960
     tggaccgcgg cggacatggc agctcagacc accaagcaca agtgggaggc ggcccatgtg      1020
     gcggagcagt tgagagccta cctggagggc acgtgcgtgg agtggctccg cagatacctg      1080
     gagaacggga aggagacgct gcagcgcacg ggtaccaggg gccacggggc gcctccctga      1140
     tcgcctgtag atctcccggg ctggcctccc acaaggaggg gagacaattg ggaccaacac      1200
     tagaatatcg ccctccctct ggtcctgagg gagaggaatc ctcctgggtt tccagatcct      1260
     gtaccagaga gtgactctga ggttccgccc tgctctctga cacaattaag ggataaaatc      1320
     tctgaaggaa tgacgggaag acgatccctc gaatactgat gagtggttcc ctttgacaca      1380
     cacaggcagc agccttgggc ccgtgacttt tcctctcagg ccttgttctc tgcttcacac      1440
     tcaatgtgtg tgggggtctg agtccagcac ttctgagtcc ttcagcctcc actcaggtca      1500
     ggaccagaag tcgctgttcc ctcttcaggg actagaattt tccacggaat aggagattat      1560
     cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc tcccttcccc atcccaggtg      1620
     tcctgtccat tctcaagata gccacatgtg tgctggagga gtgtcccatg acagatgcaa      1680
     aatgcctgaa tgatctgact cttcctgaca gacgccccca aaacgcatat gactcaccac      1740
     gctgtctctg accatgaagc caccctgagg tgctgggccc tgagcttcta ccctgcggag      1800
     atcacactga cctggcagcg ggatggggag gaccagaccc aggacacgga gctcgtggag      1860
     accaggcctg caggggatgg aaccttccag aagtgggcgg ctgtggtggt gccttctgga      1920
     caggagcaga gatacacctg ccatgtgcag catgagggtt tgcccaagcc cctcaccctg      1980
     agatggggta aggagggaga cgggggtgtc atgtctttta gggaaagcag gagcctctct      2040
     gacctttagc agggtcaggg cccctcacct tcccctcttt tcccagagcc gtcttcccag      2100
     cccaccatcc ccatcgtggg catcattgct ggcctggttc tctttggagc tgtgatcact      2160
     ggagctgtgg tcgctgctgt gatgtggagg aggaagagct caggtgggga aggggtgaag      2220
     ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct      2280
     gcctcgttac tgggaagcac cacccacaat tatgggccta cccagcctgg gccctgtgtg      2340
     ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat      2400
     tacagcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga      2460
     ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg      2520
     ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc      2580
     ctctaggacc ttaaggccct gactcctttc tggtatctca caggacattt tcttcccaca      2640
     gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg      2700
     aggtccttgg gatattgtgt ttgggagccc atgggggagc tcacccaccc cacaattcct      2760
     cctctagcca catcttctgt gggatctgac caggttctgt ttttgttcta ccccaggcag      2820
     tgacagtgcc cagggctctg atgtgtctct cacagcttgt aaaggtgaga gcctggaggg      2880
     cctgatgtgt gttgggtgtt gggcggaaca gtggacacag ctgtgctatg gggtttcttt      2940
     ccattggatg tattgagcat gcgatgggct gtttaaagtg tgacccctca ctgtgacaga      3000
     tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact      3060
     gagaggcaag agttgttcct gcccttccct ttgtgacttg aagaaccctg actt            3114
//