Dbfetch
ID KT957437; SV 1; linear; genomic DNA; STD; HUM; 3114 BP.
XX
AC KT957437;
XX
DT 01-APR-2016 (Rel. 128, Created)
DT 01-APR-2016 (Rel. 128, Last updated, Version 1)
XX
DE Homo sapiens isolate NT01290a MHC class I antigen (HLA-A) gene,
DE HLA-A*02:06:01:03 variant allele, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3114
RA Lazaro A.M., Hou L., Hurley C.K.;
RT "Novel HLA class I alleles";
RL Unpublished.
XX
RN [2]
RP 1-3114
RA Lazaro A.M., Hou L., Hurley C.K.;
RT ;
RL Submitted (23-OCT-2015) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
XX
DR MD5; 91b6f592d07d12c472077588e86fc588.
DR IMGT/HLA; HLA-A*02:06:01:03; HLA14087.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign MPS v. 1.0.0.792; GenDex v.
CC 1.9.3.4077
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3114
FT /organism="Homo sapiens"
FT /isolate="NT01290a"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <122..>2864
FT /gene="HLA-A"
FT /allele="HLA-A*02:06:01:03 variant"
FT mRNA join(<122..194,325..594,836..1111,1712..1987,2087..2203,
FT 2642..2674,2817..>2864)
FT /gene="HLA-A"
FT /allele="HLA-A*02:06:01:03 variant"
FT /product="MHC class I antigen"
FT CDS join(122..194,325..594,836..1111,1712..1987,2087..2203,
FT 2642..2674,2817..>2864)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*02:06:01:03 variant"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A142J2B6"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A142J2B6"
FT /protein_id="AMR70931.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA
FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDVSLTACK"
XX
SQ Sequence 3114 BP; 605 A; 889 C; 961 G; 659 T; 0 other;
gacccagttc tcactcccat tgggtgtcgg gtttccagag aagccaatca gtgtcgtcgc 60
ggtcgcggtt ctaaagtccg cacgcaccca ccgggactca gattctcccc agacgccgag 120
gatggccgtc atggcgcccc gaaccctcgt cctgctactc tcgggggctc tggccctgac 180
ccagacctgg gcgggtgagt gcggggtcgg gagggaaacg gcctctgtgg ggagaagcaa 240
cgggcccgcc tggcgggggc gcaggacccg ggaagccgcg ccgggaggag ggtcgggcgg 300
gtctcagcca ctcctcgtcc ccaggctctc actccatgag gtatttctac acctccgtgt 360
cccggcccgg ccgcggggag ccccgcttca tcgcagtggg ctacgtggac gacacgcagt 420
tcgtgcggtt cgacagcgac gccgcgagcc agaggatgga gccgcgggcg ccgtggatag 480
agcaggaggg tccggagtat tgggacgggg agacacggaa agtgaaggcc cactcacaga 540
ctcaccgagt ggacctgggg accctgcgcg gctactacaa ccagagcgag gccggtgagt 600
gaccccggcc cggggcgcag gtcacgacct ctcatccccc acggacgggc caggtcgccc 660
acagtctccg ggtccgagat ccgccccgaa gccgcgggac cccgagaccc ttgccccggg 720
agaggcccag gtgcctttac ccggtttcat tttcagttta ggccaaaaat ccccccaggt 780
tggtcggggc ggggcggggc tcgggggacc gggctgaccg cggggtccgg gccaggttct 840
cacaccgtcc agaggatgta tggctgcgac gtggggtcgg actggcgctt cctccgcggg 900
taccaccagt acgcctacga cggcaaggat tacatcgccc tgaaagagga cctgcgctct 960
tggaccgcgg cggacatggc agctcagacc accaagcaca agtgggaggc ggcccatgtg 1020
gcggagcagt tgagagccta cctggagggc acgtgcgtgg agtggctccg cagatacctg 1080
gagaacggga aggagacgct gcagcgcacg ggtaccaggg gccacggggc gcctccctga 1140
tcgcctgtag atctcccggg ctggcctccc acaaggaggg gagacaattg ggaccaacac 1200
tagaatatcg ccctccctct ggtcctgagg gagaggaatc ctcctgggtt tccagatcct 1260
gtaccagaga gtgactctga ggttccgccc tgctctctga cacaattaag ggataaaatc 1320
tctgaaggaa tgacgggaag acgatccctc gaatactgat gagtggttcc ctttgacaca 1380
cacaggcagc agccttgggc ccgtgacttt tcctctcagg ccttgttctc tgcttcacac 1440
tcaatgtgtg tgggggtctg agtccagcac ttctgagtcc ttcagcctcc actcaggtca 1500
ggaccagaag tcgctgttcc ctcttcaggg actagaattt tccacggaat aggagattat 1560
cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc tcccttcccc atcccaggtg 1620
tcctgtccat tctcaagata gccacatgtg tgctggagga gtgtcccatg acagatgcaa 1680
aatgcctgaa tgatctgact cttcctgaca gacgccccca aaacgcatat gactcaccac 1740
gctgtctctg accatgaagc caccctgagg tgctgggccc tgagcttcta ccctgcggag 1800
atcacactga cctggcagcg ggatggggag gaccagaccc aggacacgga gctcgtggag 1860
accaggcctg caggggatgg aaccttccag aagtgggcgg ctgtggtggt gccttctgga 1920
caggagcaga gatacacctg ccatgtgcag catgagggtt tgcccaagcc cctcaccctg 1980
agatggggta aggagggaga cgggggtgtc atgtctttta gggaaagcag gagcctctct 2040
gacctttagc agggtcaggg cccctcacct tcccctcttt tcccagagcc gtcttcccag 2100
cccaccatcc ccatcgtggg catcattgct ggcctggttc tctttggagc tgtgatcact 2160
ggagctgtgg tcgctgctgt gatgtggagg aggaagagct caggtgggga aggggtgaag 2220
ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2280
gcctcgttac tgggaagcac cacccacaat tatgggccta cccagcctgg gccctgtgtg 2340
ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2400
tacagcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2460
ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2520
ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2580
ctctaggacc ttaaggccct gactcctttc tggtatctca caggacattt tcttcccaca 2640
gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg 2700
aggtccttgg gatattgtgt ttgggagccc atgggggagc tcacccaccc cacaattcct 2760
cctctagcca catcttctgt gggatctgac caggttctgt ttttgttcta ccccaggcag 2820
tgacagtgcc cagggctctg atgtgtctct cacagcttgt aaaggtgaga gcctggaggg 2880
cctgatgtgt gttgggtgtt gggcggaaca gtggacacag ctgtgctatg gggtttcttt 2940
ccattggatg tattgagcat gcgatgggct gtttaaagtg tgacccctca ctgtgacaga 3000
tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3060
gagaggcaag agttgttcct gcccttccct ttgtgacttg aagaaccctg actt 3114
//