Dbfetch
ID KT819309; SV 1; linear; genomic DNA; STD; HUM; 3494 BP. XX AC KT819309; XX DT 14-MAR-2016 (Rel. 128, Created) DT 14-MAR-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens isolate NT01276a MHC class I antigen (HLA-C) gene, DE HLA-C*02:10v allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3494 RA Lazaro A.M., Hou L., Hurley C.K.; RT "Novel HLA class I allele"; RL Unpublished. XX RN [2] RP 1-3494 RA Lazaro A.M., Hou L., Hurley C.K.; RT ; RL Submitted (23-SEP-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; ab005244c7641973115c892618d9a514. DR IMGT/HLA; HLA-C*02:10:01:02; HLA14218. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. V1.0.0792 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3494 FT /organism="Homo sapiens" FT /isolate="NT01276a" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <442..>3334 FT /gene="HLA-C" FT /allele="HLA-C*02:10v" FT mRNA join(<442..514,645..914,1160..1435,2023..2298,2420..2539, FT 2979..3011,3119..3166,3330..>3334) FT /gene="HLA-C" FT /allele="HLA-C*02:10v" FT /product="MHC class I antigen" FT CDS join(442..514,645..914,1160..1435,2023..2298,2420..2539, FT 2979..3011,3119..3166,3330..3334) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*02:10v" FT /product="MHC class I antigen" FT /db_xref="GOA:G9FZ34" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:G9FZ34" FT /protein_id="AMO26195.1" FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPSRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGECVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3494 BP; 647 A; 1030 C; 1077 G; 740 T; 0 other; tctcagggtc tcaggctcca agggccgtgt ctgcactggg gaggcgccgc gttgaggatt 60 ctccactccc ctgagtttca cttcttctcc caacctgcga cgggtccttc ttcctgaata 120 ctcatgacgc gtccccaatt cccactccca ttgggtgtcg ggttctagaa gtcccaggtc 180 ccgggcgggg ctctcagggt ctcaggctcc aagggccgtg tctgcactgg ggaggcgccg 240 cgttgaggat tctccactcc cctgagtttc acttcttctc ccaacctgcg acgggtcctt 300 cttcctgaat actcatgacg cgtccccaat tcccactccc attgggtgtc gggttctaga 360 gaagccaatc agcgtctccg cagtcccggt tctaaagtcc ccagtcaccc acccggactc 420 ggattctccc cagacgccga gatgcgggtc atggcgcccc gaaccctcct cctgctgctc 480 tcgggagccc tggccctgac cgagacctgg gcctgtgagt gcggggttgg gagggaaacg 540 gcctctgcgg agaggagcga ggggcccgcc cggcgagggc gcaggacccg gggagccgcg 600 cagggaggag ggtcgggcgg gtctcagccc ctcctctccc ccaggctccc actccatgag 660 gtatttctac accgctgtgt cccggcccag ccgcggagag ccccacttca tcgcagtggg 720 ctacgtggac gacacgcagt tcgtgcggtt cgacagcgac gccgcgagtc caagagggga 780 gccgcgggcg ccgtgggtgg agcaggaggg gccggagtat tgggaccggg agacacagaa 840 gtacaagcgc caggcacaga ctgaccgagt gaacctgcgg aaactgcgcg gctactacaa 900 ccagagcgag gccggtgagt gaccccggcc cggggcgcag gtcacgaccc ctccccatcc 960 cccacggacg gcccgggtcg ccccgagtct ccgggtctga gatccacccc gaggctgcgg 1020 aatccgccca gaccctcgac cggagagagc cccagtcacc tttacccggt ttcattttca 1080 gtttaggcca aaatccccgc gggttggtcg gggctggggc ggggctcggg ggacgggctg 1140 accacggggg cggggccagg gtctcacacc ctccagagga tgtacggctg cgacctgggg 1200 cccgacgggc gcctcctccg cgggtatgac cagtccgcct acgacggcaa ggattacatc 1260 gccctgaacg aggacctgcg ctcctggacc gccgcggaca cggcggctca gatcacccag 1320 cgcaagtggg aggcggcccg tgaggcggag cagtggagag cctacctgga gggcgagtgc 1380 gtggagtggc tccgcagata cctggagaac gggaaggaga cgctgcagcg cgcgggtacc 1440 aggggcagtg gggagccttc cccatctcct gtagatctcc cgggatggcc tcccacgagg 1500 aggggaggaa aatgggatca gcgctagaat atcgccctcc cttgaatgga gaatgggatg 1560 agttttcctg agtttcctct gagggccccc tctgctctct aggacaatta agggatgaag 1620 tccttgagga aatggagggg aagacagtcc ctggaatact gatcaggggt cccctttgac 1680 cactttgacc actgcagcag ctgtggtcag gctgctgacc tttctctcag gccttgttct 1740 ctgcctcacg ctcaatgtgt ttgaaggttt gattccagct tttctgagtc cttcggcctc 1800 cactcaggtc aggaccagaa gtcgctgttc ctccctcaga gactagaact ttccaatgaa 1860 taggagatta tcccaggtgc ctgtgtccag gctggcgtct gggttctgtg cccccttccc 1920 caccccaggt gtcctgtcca ttctcaggat agtcacatgg gcgctgttgg agtgtcgcaa 1980 gagagataca aagtgtctga attttctgac tcttcccgtc agaacaccca aagacacacg 2040 tgacccacca tcccgtctct gaccatgagg ccaccctgag gtgctgggcc ctgggcttct 2100 accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact caggacaccg 2160 agcttgtgga gaccaggcca gcaggagatg gaaccttcca gaagtgggca gctgtggtgg 2220 tgccttctgg agaagagcag agatacacgt gccatgtgca gcacgagggg ctgccggagc 2280 ccctcaccct gagatggggt aaggaggggg atgaggggtc atgtgtcttc tcagggaaag 2340 cagaagtcct ggagcccttc agctgggtca gggctgaggc ttgggggtca gggcccctca 2400 ccttcccctc ctttcccaga gccatcttcc cagcccacca tccccatcgt gggcatcgtt 2460 gctggcctgg ctgtcctggc tgtcctagct gtcctaggag ctgtggtggc tgttgtgatg 2520 tgtaggagga agagctcagg tagggaaggg gtgaggagtg gggtctgggt tttcttgtcc 2580 cactgggagt ttcaagcccc aggtagaagt gtgccccacc tcgttactgg aagcaccatc 2640 cacacatggg ccatcccagc ctgggaccct gtgtgccagc acttactctg ttgtgaagca 2700 catgacaatg aaggacagat gtatcacctt gatgattatg gtgttggggt ccttgattcc 2760 agcattcatg agtcagggga aggtccctgc taaggacaga ccttaggagg gcagttgctc 2820 cagaacccac agctgctttc cccgtgtttc ctgatcctgc cctgggtctg cagtcatagt 2880 tctggaaact tctcttgggt ccaagactag gaggttcccc taagattgca tggccctgcc 2940 tcctccctgt cccctcacag ggcattttct tcccacaggt ggaaaaggag ggagctgctc 3000 tcaggctgcg tgtaagtgat ggcggcaggc gtgtggagga gctcacccac cccataattc 3060 ctcttgtccc acatctcctg tgggctctga ccaggtcttt ttttttgttc taccccagcc 3120 agcaacagtg cccagggctc tgatgagtct ctcatcgctt gtaaaggtga gattctggga 3180 gctgaagtgg tcgggggtgg ggcagaggga aaaggcctag gtaatgggga tcctttgatt 3240 gggacgtttc gaatgtgtgg tgagctgttc agagtgtcat cacttaccat gactgacctg 3300 aatttgttca tgactattgt gttctgtagc ctgagacagc tgcctgtgtg ggactgagat 3360 gcaggatttc ttcacacctc tcctttgtga cttcaagagc ctctggcatc tctttctaca 3420 aaggcatctg aatgtgtctg cgttcctgtt agcataatgt gaggaggtgg agagacagcc 3480 cacccccgtg tcca 3494 //