Dbfetch
ID KT735123; SV 1; linear; genomic DNA; STD; HUM; 3200 BP. XX AC KT735123; XX DT 04-MAR-2016 (Rel. 128, Created) DT 04-MAR-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens isolate BY01269 MHC class I antigen (HLA-C) gene, HLA-C*12:59 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3200 RA Lazaro A.M., Hou L., Hurley C.K.; RT "Novel HLA class I allele"; RL Unpublished. XX RN [2] RP 1-3200 RA Lazaro A.M., Hou L., Hurley C.K.; RT ; RL Submitted (11-SEP-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; a54ee3bdb2615c41b0907c2673fe4f57. DR IMGT/HLA; HLA-C*12:59; HLA06722. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. V1.0.0792; Gendex v. CC V1.7.0.2937 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3200 FT /organism="Homo sapiens" FT /isolate="BY01269" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <275..>3169 FT /gene="HLA-C" FT /allele="HLA-C*12:59" FT mRNA join(<275..347,478..747,994..1269,1857..2132,2254..2373, FT 2813..2845,2953..3000,3165..>3169) FT /gene="HLA-C" FT /allele="HLA-C*12:59" FT /product="MHC class I antigen" FT CDS join(275..347,478..747,994..1269,1857..2132,2254..2373, FT 2813..2845,2953..3000,3165..3169) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*12:59" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A140EXM1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A140EXM1" FT /protein_id="AML47712.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSGPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPHGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3200 BP; 591 A; 940 C; 1011 G; 658 T; 0 other; gaagtcccag gtcccgggcg gggctctcag ggtctcaggc tccaagggcc gtgtctgcac 60 tggggaggcg ccgcgttgag gattctccac tcccctgagt ttcacttctt ctcccaacct 120 gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc aattcccact cccattgggt 180 gtcgggttct agagaagcca atcagcgtct ccgcagtccc ggttctaaag tccccagtca 240 cccacccgga ctcggattct ccccagacgc cgagatgcgg gtcatggcgc cccgaaccct 300 catcctgctg ctctcgggag ccctggccct gaccgagacc tgggcctgtg agtgcggggt 360 tgggagggaa acggcctctg cggagaggag cgaggggccc gcccggcgag ggcgcaggac 420 ccggggagcc gcgcagggag gagggtcggg cgggtctcag cccctcctcg cccccaggct 480 cccactccat gaggtatttc tacaccgccg tgtccgggcc cggccgcgga gagccccgct 540 tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg gttcgacagc gacgccgcga 600 gtccaagagg ggagccgcgg gcgccgtggg tggagcagga ggggccggag tattgggacc 660 gggagacaca gaagtacaag cgccaggcac aggctgaccg agtgagcctg cggaacctgc 720 gcggctacta caaccagagc gaggccggtg agtgaccccg gcccggggcg caggtcacga 780 cctctcccca tcccccacgg acggcccggg tcgccccgag tctcccggtc tgagatccac 840 cccgaggctg cggaacccgc ccagaccctc gaccggagag agccccagtc acctttaccc 900 ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg tcggggctgg ggcggggctc 960 gggggacggg gctgaccacg ggggcggggc cagggtctca caccctccag tggatgtatg 1020 gctgcgacct ggggccccac gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg 1080 gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg gacacggcgg 1140 ctcagatcac ccagcgcaag tgggaggcgg cccgtgaggc ggagcagtgg agagcctacc 1200 tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag gagacgctgc 1260 agcgcgcggg taccaggggc agtggggagc cttccccatc tcctgtagat ctcccgggat 1320 ggcctcccac gaggagggga ggaaaatggg atcagcgcta gaatatcgcc ctcccttgaa 1380 tggagaatgg gatgagtttt cctgagtttc ctctgagggc cccctctgct ctctaggaca 1440 attaagggat gaagtccttg aggaaatgga ggggaagaca gtccctggaa tactgatcag 1500 gggtcccctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct gacctttctc 1560 tcaggccttg ttctctgcct cacgctcaat gtgtttaaag gtttgattcc agcttttctg 1620 agtccttcgg cctccactca ggtcaggacc agaagtcgct gttcctccct cagagactag 1680 aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc gtctgggttc 1740 tgtgccccct tccccacccc aggtgtcctg tccattctca ggatggtcac atgggcgctg 1800 ttggagtgtc gcaagagaga tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca 1860 cccaaagaca cacgtgaccc accatcccgt ctctgaccat gaggccaccc tgaggtgctg 1920 ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca 1980 aactcaggac accgagcttg tggagaccag gccagcagga gatggaacct tccagaagtg 2040 ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acgtgccatg tgcagcacga 2100 ggggctgcca gagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatgtgt 2160 cttctcaggg aaagcagaag tcctggagcc cttcagccgg gtcagggctg aggcttgggg 2220 gtcagggccc ctcaccttcc cctcctttcc cagagccatc ttcccagccc accatcccca 2280 tcgtgggcat cgttgctggc ctggctgtcc tggctgtcct agctgtccta ggagctgtga 2340 tggctgttgt gatgtgtagg aggaagagct caggtaggga aggggtgagg agtggggtct 2400 gggttttctt gtcccactgg gagtttcaag ccccaggtag aagtgtgccc cacctcgtta 2460 ctggaagcac catccacaca tgggccatcc cagcctggga ccctgtgtgc tagcacttac 2520 tctgttgtga agcacatgac aatgaaggac agatgtatca ccttgatgat tatggtgttg 2580 gggtccttga ttccagcatt catgagtcag gggaaggtcc ctgctaagga cagaccttag 2640 gagggcagtt gctccagaac ccacagctgc tttccccgtg tttcctgatc ctgccctggg 2700 tctgcagtca tagttctgga aacttctctt gggtccaaga ctaggaggtt cccctaagat 2760 cgcatggccc tgcctcctcc ctgtcccctc acagggcatt ttcttcccac aggtggaaaa 2820 ggagggagct gctctcaggc tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac 2880 ccaccccata attcctcttg tcccacatct cctgcgggct ctgaccaggt cttttttttt 2940 gttctacccc agccagcaac agtgcccagg gctctgatga gtctctcatc gcttgtaaag 3000 gtgagattct ggggagctga agtggtctgg ggtggggcag agggaaaagg cctaggtaat 3060 ggggatcctt tgattgggac gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt 3120 accatgactg acctgaattt gttcatgact attgtgttct gtagcctgag acagctgcct 3180 gtgtgggact gagatgcagg 3200 //