Dbfetch
ID KT321460; SV 1; linear; genomic DNA; STD; HUM; 2689 BP. XX AC KT321460; XX DT 22-DEC-2015 (Rel. 127, Created) DT 22-DEC-2015 (Rel. 127, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*78:02:02V allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2689 RA Lazaro A.M., Masaberg C., Hou L., Hurley C.K.; RT ; RL Submitted (22-JUL-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; 7ee7bbb0b6dde85a3e31e9ee1dafb110. DR IMGT/HLA; HLA-B*78:09; HLA13984. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. V1.0.0.792; Gendex v. CC V1.7.0.2937 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2689 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="NT01236" FT /db_xref="taxon:9606" FT gene <1..>2689 FT /gene="HLA-B" FT /allele="HLA-B*78:02:02V" FT mRNA join(<1..73,203..472,718..993,1569..1844,1949..2065, FT 2507..2539,2646..>2689) FT /gene="HLA-B" FT /allele="HLA-B*78:02:02V" FT /product="MHC class I antigen" FT CDS join(1..73,203..472,718..993,1569..1844,1949..2065, FT 2507..2539,2646..2689) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*78:02:02V" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A0U3BX63" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0U3BX63" FT /protein_id="ALT08034.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRN FT LRGYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 2689 BP; 504 A; 796 C; 854 G; 535 T; 0 other; atgcgggtca cggcgccccg aaccgtcctc ctgctgctct ggggggcagt ggccctgacc 60 gagacctggg ccggtgagtg cggggtcggg agggaaatgg cctctgtggg gaggagcgag 120 gggaccgcag gcgggggcgc aggacctgag gagccgcgcc gggaggaggg tcgggcgggt 180 ctcagcccct cctcgccccc aggctcccac tccatgaggt atttctacac cgccatgtcc 240 cggcccggcc gcggggagcc ccgcttcatt gcagtgggct acgtggacga cacccagttc 300 gtgaggttcg acagcgacgc cgcgagtccg aggacggagc cccgggcgcc atggatagag 360 caggaggggc cggagtattg ggaccggaac acacagatct tcaagaccaa cacacagact 420 taccgagaga acctgcggaa cctgcgcggc tactacaacc agagcgaggc cggtgagtga 480 ccccggcccg gggcgcaggt cacgactccc catcccccac gtacggcccg ggtcgccccg 540 agtctccggg tccgagatcc gcctccctga ggccgcggga cccgcccaga ccctcgaccg 600 gcgagagccc caggcgcgtt tacccggttt cattttcagt tgaggccaaa atccccgcgg 660 gttggtcggg gcggggcggg gctcggggga cggtgctgac cgcggggccg gggccagggt 720 ctcacacttg gcagacgatg tatggctgcg acgtggggcc ggacgggcgc ctcctccgcg 780 ggcataacca gtacgcctac gacggcaaag attacatcgc cctgaacgag gacctgagct 840 cctggaccgc ggcggacacc gcggctcaga tcacccagcg caagtgggag gcggcccgtg 900 aggcggagca gctgagagcc tacctggagg gcctgtgcgt ggagtggctc cgcagacacc 960 tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc 1020 catctcctat aggtcgccgg ggatggcctc ccacgagaag aggaggaaaa tgggatcagc 1080 gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga 1140 gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa 1200 gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc 1260 gtgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat 1320 tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc cctgttcccc 1380 gctcagagac tcgaactttc caatgaatag gagattatcc caggtgcctg cgtccaggct 1440 ggtgtctggg ttctgtgccc cttccccaca ccaggtgtcc tgtccattct caggctggtc 1500 acatgggtgg tcctagggtg tcccatgaga gatgcaaagc gcctgaattt tctgactctt 1560 cccatcagac cccccaaaga cacacgtgac ccaccacccc gtctctgacc atgaggccac 1620 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1680 tggcgaggac caaactcagg acactgagct tgtggagacc agaccagcag gagatagaac 1740 cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat acacatgcca 1800 tgtacagcat gaggggctgc cgaagcccct caccctgaga tggggtaagg agggggatga 1860 ggggtcatat ctcttctcag ggaaagcagg agcccttctg gagcccttca gcagggtcag 1920 ggcccctcgt cttcccctcc tttcccagag ccatcttccc agtccaccat ccccatcgtg 1980 ggcattgttg ctggcctggc tgtcctagca gttgtggtca tcggagctgt ggtcgctact 2040 gtgatgtgta ggaggaagag ctcaggtagg gaaggggtga ggggtggggt ctgggttttc 2100 ttgtcccact gggggtttca agccccaggt agaagtgttc cctgcctcat tactgggaag 2160 cagcatccac acaggggcta acgcagcctg ggaccctgtg tgccagcact tactcttttg 2220 tgcagcacat gtgacaatga aggacggatg tatcaccttg atggttgtgg tgttggggtc 2280 ctgatttcag cattcatgag tcaggggaag gtccctgcta aggacagacc ttaggagggc 2340 agttggtcca ggacccacac ttgctttcct cgtgtttcct gatcctgcct tgggtctgta 2400 gtcatacttc tggaaattcc ttttgggtcc aagacgagga ggttcctcta agatctcatg 2460 gccctgcttc ctcccagtcc cctcacagga cattttcttc ccacaggtgg aaaaggaggg 2520 agctactctc aggctgcgtg taagtggtgg gggtgggagt gtggaggagc tcacccaccc 2580 cataattcct cctgtcccac gtctcctgcg ggctctgacc aggtcctgtt tttgttctac 2640 tccagccagc gacagtgccc agggctctga tgtgtctctc acagcttga 2689 //