Dbfetch
ID KT119430; SV 1; linear; genomic DNA; STD; HUM; 2979 BP. XX AC KT119430; XX DT 08-DEC-2015 (Rel. 127, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*01:01:01:01V-ny01161 DE allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2979 RA Lazaro A.M., Hou L., Hurley C.K.; RT ; RL Submitted (11-JUN-2015) to the INSDC. RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC RL 20057, USA XX DR MD5; 79602e48a480c1798da90c56d16732ed. DR IMGT/HLA; HLA-A*01:01:71; HLA13620. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign MPS v. V1.0.0792; Gendex v. CC V1.7.0.2937 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2979 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="BY01161-" FT /db_xref="taxon:9606" FT gene <1..>2729 FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01V-ny01161" FT mRNA join(<1..73,204..473,715..990,1570..1845,1948..2064, FT 2507..2539,2682..>2729) FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01V-ny01161" FT /product="MHC class I antigen" FT CDS join(1..73,204..473,715..990,1570..1845,1948..2064, FT 2507..2539,2682..>2729) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01V-ny01161" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A0S2IIT2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0S2IIT2" FT /protein_id="ALO23536.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACK" XX SQ Sequence 2979 BP; 573 A; 847 C; 931 G; 628 T; 0 other; atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 60 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 120 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggaggagg gtcgggcagg 180 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 240 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 300 cgtgcggttc gacagcgacg ccgcgagcca gaagatggag ccgcgggcgc cgtggataga 360 gcaggagggg ccggagtatt gggaccagga gacacggaat atgaaggccc actcacagac 420 tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 480 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 540 cagtctccgg gtccgagatc caccccgaag ccgcgggact ccgagaccct tgtcccggga 600 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 660 ggtcggggcg gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 720 acaccatcca gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 780 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 840 ggaccgcggc ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gtccatgcgg 900 cggagcagcg gagagtctac ctggagggcc ggtgcgtgga cgggctccgc agatacctgg 960 agaacgggaa ggagacgctg cagcgcacag gtaccagggg ccacggggcg cctccctgat 1020 cgcctataga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1080 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1140 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1200 ctgaaggagt gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacaccg 1260 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1320 gtgtgtgggg gtctgagtcc agcacttctg agtctctcag cctccactca ggtcaggacc 1380 agaagtcgct gttcccttct cagggaatag aagattatcc caggtgcctg tgtccaggct 1440 ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1500 cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1560 tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1620 ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1680 atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca ggggatggaa 1740 ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga tacacctgcc 1800 atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 1860 ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 1920 gcccctcacc ttcccctctt ttcccagagc tgtcttccca gcccaccatc cccatcgtgg 1980 gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgccg 2040 tgatgtggag gaggaagagc tcaggtggag aaggggtgaa gggtggggtc tgagatttct 2100 tgtctcactg agggttccaa gccccagcta gaaatgtgcc ctgtctcatt actgggaagc 2160 accttccaca atcatgggcc gacccagcct gggccctgtg tgccagcact tactcttttg 2220 taaagcacct gttaaaatga aggacagatt tatcaccttg attacggcgg tgatgggacc 2280 tgatcccagc agtcacaagt cacaggggaa ggtccctgag gacagacctc aggagggcta 2340 ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg ggtctgcagt 2400 cacacatttc tggaaacttc tctggggtcc aagactagga ggttcctcta ggaccttaag 2460 gccctggctc ctttctggta tctcacagga cattttcttc ccacagatag aaaaggaggg 2520 agttacactc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc cttgggatat 2580 tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct agccacatct 2640 tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca gtgcccaggg 2700 ctctgatgtg tctctcacag cttgtaaagg tgagagcttg gagggcctga tgtgtgttgg 2760 gtgttgggtg gaacagtgga cacagctgtg ctatggggtt tctttgcgtt ggatgtattg 2820 agcatgcgat gggctgttta aggtgtgacc cctcactgtg atggatatga atttgttcat 2880 gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag gcaagagttg 2940 ttcctgccct tccctttgtg acttgaagaa ccctgactt 2979 //