Dbfetch

Dbfetch

ID   KP768457; SV 1; linear; genomic DNA; STD; HUM; 787 BP.
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AC   KP768457;
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DT   19-SEP-2015 (Rel. 126, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 16)
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DE   Homo sapiens nonfunctional MHC class I antigen (HLA-A) gene, HLA-A*01
DE   allele, partial sequence.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-787
RA   Kipper K., Hirv K.;
RT   "Identification of a new HLA-A*01 allele by next generation sequencing";
RL   Unpublished.
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RN   [2]
RP   1-787
RA   Kipper K., Hirv K.;
RT   ;
RL   Submitted (11-FEB-2015) to the INSDC.
RL   Immunogenetics, Center for Human Genetics and Laboratory Diagnostics,
RL   Lochhamer Str. 29, Martinsried 82152, Germany
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DR   MD5; 3df4ae5945a2945aa2245ad5a1016c96.
DR   IMGT/HLA; HLA-A*01:179N; HLA13326.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: SeqPilot v. 4.2.0
CC   Assembly Name         :: P-519601
CC   Coverage              :: 100
CC   Sequencing Technology :: 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..787
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>787
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*01"
FT                   /note="nonfunctional MHC class I antigen"
FT   gap             271..511
FT                   /estimated_length=241
FT   variation       748
FT                   /gene="HLA-A"
FT                   /replace="a"
FT                   /note="introduces premature stop codon"
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SQ   Sequence 787 BP; 111 A; 164 C; 195 G; 76 T; 241 other;
     gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagaa gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg       180
     accaggagac acggaatatg aaggcccact cacagactga ccgagcgaac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngttctcaca ccatccagat aatgtatggc       540
     tgcgacgtgg ggccggacgg gcgcttcctc cgcgggtacc ggcaggacgc ctacgacggc       600
     aaggattaca tcgccctgaa cgaggacctg cgctcttgga ccgcggcgga catggcagct       660
     cagatcacca agcgcaagtg ggaggcggtc catgcggcgg agcagcggag agtctacctg       720
     gagggccggt gcgtggacgg gctccgctga tacctggaga acgggaagga gacgctgcag       780
     cgcacgg                                                                 787
//