Dbfetch

Dbfetch

ID   KP644242; SV 1; linear; genomic DNA; STD; HUM; 1845 BP.
XX
AC   KP644242;
XX
DT   06-MAY-2015 (Rel. 124, Created)
DT   06-MAY-2015 (Rel. 124, Last updated, Version 1)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*07 variant allele,
DE   partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1845
RA   Marino S.R., Brown N.K., Kheradmand T., Artz A.;
RT   "Hematopoietic Stem Cell Transplant Options for Patients with Hematological
RT   Malignancies Who Carry New HLA Alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-1845
RA   Marino S.R., Brown N.K., Kheradmand T.;
RT   ;
RL   Submitted (12-JAN-2015) to the INSDC.
RL   Pathology, University of Chicago, MC 0006; 5841 South Maryland Ave.,
RL   Chicago, IL 60637, USA
XX
DR   MD5; 23996fbc3da7acf71c9c8f2e551c27b1.
DR   IMGT/HLA; HLA-B*07:238; HLA12759.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1845
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="peripheral blood; buccal cells"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1845
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 variant"
FT   mRNA            join(<122..391,637..912,1487..>1762)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<122..391,637..912,1487..>1762)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 variant"
FT                   /product="MHC class I antigen"
FT                   /note="major histocompatibility complex, class I, B"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:A0A0F6TLB1"
FT                   /protein_id="AKE47355.1"
FT                   /translation="SHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREE
FT                   PRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGP
FT                   DGRLLRGHDQYAYDGKDYIALNEDLRSWTAADSAAQITQRKWEAAREAEQRRAYLEGEC
FT                   VEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT   gap             1007..1455
FT                   /estimated_length=449
XX
SQ   Sequence 1845 BP; 272 A; 439 C; 488 G; 197 T; 449 other;
     cgggtcggga gggaaatggc ctctgccggg aggagcgagg ggaccgcagg cgggggcgca        60
     ggacctgagg agccgcgccg ggaggagggt cgggcgggtc tcagcccctc ctcaccccca       120
     ggctcccact ccatgaggta tttctacacc tccgtgtccc ggcccggccg cggggagccc       180
     cgcttcatct cagtgggcta cgtggacgac acccagttcg tgaggttcga cagcgacgcc       240
     gcgagtccga gagaggagcc gcgggcgccg tggatagagc aggaggggcc ggagtattgg       300
     gaccggaaca cacagatcta caaggcccag gcacagactg accgagagag cctgcggaac       360
     ctgcgcggct actacaacca gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc       420
     acgactcccc atcccccacg tacggcccgg gtcgccccga gtctccgggt ccgagatccg       480
     cctccctgag gccgcgggac ccgcccagac cctcgaccgg cgagagcccc aggcgcgttt       540
     acccggtttc attttcagtt gaggccaaaa tccccgcggg ttggtcgggg cggggcgggg       600
     ctcgggggac tgggctgacc gcggggccgg ggccagggtc tcacaccctc cagagcatgt       660
     acggctgcga cgtggggccg gacgggcgcc tcctccgcgg gcatgaccag tacgcctacg       720
     acggcaagga ttacatcgcc ctgaacgagg acctgcgctc ctggaccgcc gcggactcgg       780
     cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag cggagagcct       840
     acctggaggg cgagtgcgtg gagtggctcc gcagatacct ggagaacggg aaggacaagc       900
     tggagcgcgc tggtaccagg ggcagtgggg agccttcccc atctcctata ggtcgccggg       960
     gatggcctcc cacgagaaga ggaggaaaat gggatcagcg ctagaannnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnnn nnnnnagcgc ctgaattttc tgactcttcc catcagaccc cccaaagaca      1500
     cacgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg ggccctgggt      1560
     ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac      1620
     actgagcttg tggagaccag accagcagga gatagaacct tccagaagtg ggcagctgtg      1680
     gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga ggggctgccg      1740
     aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct cttctcaggg      1800
     aaagcaggag cccttcagca gggtcagggc ccctcatctt cccct                      1845
//