Dbfetch
ID KM263603; SV 1; linear; genomic DNA; STD; HUM; 2575 BP. XX AC KM263603; XX DT 13-OCT-2014 (Rel. 122, Created) DT 13-OCT-2014 (Rel. 122, Last updated, Version 1) XX DE Homo sapiens clone 016 HFE (HFE) gene, HFE*003 allele, exons 2 through 5 DE and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2575 RA Campos W.N., Massaro J.D., Martinelli A.L.C., Marsh S.G.E., Mendes C.T.Jr., RA Donadi E.A.; RT "Genetic structure of HFE coding region: SNPs, haplotypes and allele RT nomenclature standardization"; RL Unpublished. XX RN [2] RP 1-2575 RA Campos W.N., Massaro J.D., Martinelli A.L.C., Marsh S.G.E., Mendes C.T.Jr., RA Donadi E.A.; RT ; RL Submitted (31-JUL-2014) to the INSDC. RL Department of Medicine, School of Medicine of Ribeirao Preto, University of RL Sao Paulo, Avenida Bandeirantes, 3900, Ribeirao Preto, Sao Paulo 14049-900, RL Brazil XX DR MD5; cee96baa90f4902063cca3795ef0703e. DR IMGT/HLA; HFE*002; HLA14070. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2575 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="016" FT /db_xref="taxon:9606" FT gene <94..>2485 FT /gene="HFE" FT /allele="HFE*003" FT mRNA join(<94..357,567..842,1938..2213,2372..>2485) FT /gene="HFE" FT /allele="HFE*003" FT /product="HFE" FT CDS join(<94..357,567..842,1938..2213,2372..>2485) FT /codon_start=3 FT /gene="HFE" FT /allele="HFE*003" FT /product="HFE" FT /db_xref="GOA:A0A097CKB2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR031092" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A097CKB2" FT /protein_id="AIS82632.1" FT /translation="SHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPR FT TPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDN FT STEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPA FT QLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDA FT KEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTYQVEHPGLDQPLIVIWEPSPSGTLVI FT GVISGIAVFVVILFIGILFIILRKRQGS" FT exon 94..357 FT /gene="HFE" FT /allele="HFE*003" FT /number=2 FT exon 567..842 FT /gene="HFE" FT /allele="HFE*003" FT /number=3 FT gap 964..1837 FT /estimated_length=874 FT exon 1938..2213 FT /gene="HFE" FT /allele="HFE*003" FT /number=4 FT exon 2372..2485 FT /gene="HFE" FT /allele="HFE*003" FT /number=5 XX SQ Sequence 2575 BP; 384 A; 376 C; 491 G; 417 T; 907 other; agctgatggt atgagttgat gcaggtgtgt ggagcctcaa catcctgctc ccctcctact 60 acacatggtt aaggcctgtt gctctgtctc caggttcaca ctctctgcac tacctcttca 120 tgggtgcctc agagcaggac cttggtcttt ccttgtttga agctttgggc tacgtggatg 180 accagctgtt cgtgttctat gatcatgaga gtcgccgtgt ggagccccga actccatggg 240 tttccagtag aatttcaagc cagatgtggc tgcagctgag tcagagtctg aaagggtggg 300 atcacatgtt cactgttgac ttctggacta ttatggaaaa tcacaaccac agcaagggta 360 tgtggagagg gggcctcacc ttcctgaggt tgtcagagct tttcatcttt tcatgcatct 420 tgaaggaaac agctggaagt ctgagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnngc 480 ttcctgagat catttggtcc ttggggatgg tggaaatagg gacctattcc tttggttgca 540 gttaacaagg ctggggattt ttccagagtc ccacaccctg caggtcatcc tgggctgtga 600 aatgcaagaa gacaacagta ccgagggcta ctggaagtac gggtatgatg ggcaggacca 660 ccttgaattc tgccctgaca cactggattg gagagcagca gaacccaggg cctggcccac 720 caagctggag tgggaaaggc acaagattcg ggccaggcag aacagggcct acctggagag 780 ggactgccct gcacagctgc agcagttgct ggagctgggg agaggtgttt tggaccaaca 840 aggtatggtg gaaacacact tctgccccta tactctagtg gcagagtgga ggaggttgca 900 gggcacggaa tccctggttg gagtttcaga ggtggctgag gctgtgtgcc tctccaaatt 960 ctgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1680 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1800 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnngta tttccttcct ccaacctata 1860 gaaggaagtg aaagttccag tcttcctggc aagggtaaac agatcccctc tcctcatcct 1920 tcctctttcc tgtcaagtgc ctcctttggt gaaggtgaca catcatgtga cctcttcagt 1980 gaccactcta cggtgtcggg ccttgaacta ctacccccag aacatcacca tgaagtggct 2040 gaaggataag cagccaatgg atgccaagga gttcgaacct aaagacgtat tgcccaatgg 2100 ggatgggacc taccagggct ggataacctt ggctgtaccc cctggggaag agcagagata 2160 tacgtaccag gtggagcacc caggcctgga tcagcccctc attgtgatct ggggtatgtg 2220 actgatgaga gccaggagct gagaaaatct attgggggtt gagaggagtg cctgaggagg 2280 taattatggc agtgagatga ggatctgctc tttgttaggg ggtgggctga gggtggcaat 2340 caaaggcttt aacttgcttt ttctgtttta gagccctcac cgtctggcac cctagtcatt 2400 ggagtcatca gtggaattgc tgtttttgtc gtcatcttgt tcattggaat tttgttcata 2460 atattaagga agaggcaggg ttcaagtgag taggaacaag ggggaagtct cttagtacct 2520 ctgccccagg gcacagtggg aagaggggca gaggggatct ggcatccatg ggaag 2575 //