ID KF530029; SV 1; linear; genomic DNA; STD; HUM; 1269 BP.
XX
AC KF530029;
XX
DT 10-FEB-2014 (Rel. 119, Created)
DT 01-MAY-2014 (Rel. 120, Last updated, Version 2)
XX
DE Homo sapiens MHC class I chain-related A antigen (MICA) gene, MICA*002:01
DE variant allele, exons 2 through 5 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1269
RA Piancatelli D., Oumhani K., Benelbarhdadi I., Colanardi A., Del Beato T.,
RA Tessitore A., Essaid A., El Aouad R.;
RT "A novel MHC class I chain-related A (MICA) allele found in a patient from
RT Morocco";
RL Unpublished.
XX
RN [2]
RP 1-1269
RA Piancatelli D., Oumhani K., Benelbarhdadi I., Colanardi A., Del Beato T.,
RA Tessitore A., Essaid A., El Aouad R.;
RT ;
RL Submitted (12-AUG-2013) to the INSDC.
RL Institute of Translational Pharmacology (IFT) UOS L'Aquila, Consiglio
RL Nazionale delle Ricerche (CNR), Via Carducci 32, L'Aquila 67100, Italy
XX
DR MD5; 7a55aaabcb1eae113ee33f0473724a17.
DR IMGT/HLA; MICA*078; HLA10648.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign v. 3.5.1
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1269
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /country="Morocco"
FT /tissue_type="blood"
FT /db_xref="taxon:9606"
FT gene <1..>1269
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT mRNA join(<1..255,356..643,744..1022,1123..>1269)
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /product="MHC class I chain-related A antigen"
FT CDS join(<1..255,356..643,744..1022,1123..>1269)
FT /codon_start=3
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /product="MHC class I chain-related A antigen"
FT /db_xref="GOA:W5XKU5"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:W5XKU5"
FT /protein_id="AHI16961.1"
FT /translation="PHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKCRAKPQ
FT GQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNSTR
FT SSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNIRNFLKEDAMKTKTHYHAMHADC
FT LQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVSL
FT SHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKVLVLQS
FT HWQTFHVSAVAAAAAAAAAIFVIIIFYVCCCKKKTSAAEGP"
FT exon <1..255
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /number=2
FT gap 256..355
FT /estimated_length=unknown
FT exon 356..643
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /number=3
FT variation 523
FT /gene="MICA"
FT /replace="g"
FT gap 644..743
FT /estimated_length=unknown
FT exon 744..1022
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /number=4
FT gap 1023..1122
FT /estimated_length=unknown
FT exon 1123..>1269
FT /gene="MICA"
FT /allele="MICA*002:01 variant"
FT /number=5
XX
SQ Sequence 1269 BP; 243 A; 246 C; 272 G; 208 T; 300 other;
agccccacag tcttcgttat aacctcacgg tgctgtccgg ggatggatct gtgcagtcag 60
ggtttctcgc tgaggtacat ctggatggtc agcccttcct gcgctgtgac aggcagaaat 120
gcagggcaaa gccccaggga cagtgggcag aagatgtcct gggaaataag acatgggaca 180
gagagaccag ggacttgaca gggaacggaa aggacctcag gatgaccctg gctcatatca 240
aggaccagaa agaagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngcttg 360
cattccctcc aggagattag ggtctgtgag atccatgaag acaacagcac caggagctcc 420
cagcatttct actacgatgg ggagctcttc ctctcccaaa acctggagac tgaggaatgg 480
acaatgcccc agtcctccag agctcagacc ttggccatga acatcaggaa tttcttgaag 540
gaagatgcca tgaagaccaa gacacactat cacgctatgc atgcagactg cctgcaggaa 600
ctacggcgat atctaaaatc cggcgtagtc ctgaggagaa cagnnnnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnntgccccc catggtgaat gtcacccgca gcgaggcctc 780
agagggcaac attaccgtga catgcagggc ttctggcttc tatccctgga atatcacact 840
gagctggcgt caggatgggg tatctttgag ccacgacacc cagcagtggg gggatgtcct 900
gcctgatggg aatggaacct accagacctg ggtggccacc aggatttgcc aaggagagga 960
gcagaggttc acctgctaca tggaacacag cgggaatcac agcactcacc ctgtgccctc 1020
tgnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnggaaagtg ctggtgcttc 1140
agagtcattg gcagacattc catgtttctg ctgttgctgc tgctgctgct gctgctgctg 1200
ctatttttgt tattattatt ttctacgtct gttgttgtaa gaagaaaaca tcagctgcag 1260
agggtccag 1269
//