ID KF527790; SV 1; linear; genomic DNA; STD; HUM; 1548 BP.
XX
AC KF527790;
XX
DT 27-NOV-2013 (Rel. 119, Created)
DT 19-AUG-2014 (Rel. 121, Last updated, Version 3)
XX
DE Homo sapiens isolate D11018431 MHC class I antigen (HLA-C) gene,
DE HLA-C*07:172:02 allele, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1548
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT "95 novel alleles for HLA gene found by BGI in 2011 year";
RL Unpublished.
XX
RN [2]
RP 1-1548
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT ;
RL Submitted (08-AUG-2013) to the INSDC.
RL Healthcare, BGI, Third Floor, BGI Second Building, Beishan Industrial Zone,
RL Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China
XX
DR MD5; abac75ea25c69a6d25300aa2ca938ae9.
DR IMGT/HLA; HLA-C*07:172:02; HLA10614.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1548
FT /organism="Homo sapiens"
FT /isolate="D11018431"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1548
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..1415,
FT 1516..>1548)
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..1415,
FT 1516..>1548)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /product="MHC class I antigen"
FT /note="antigen presenting molecule"
FT /db_xref="GOA:V5NQW1"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:V5NQW1"
FT /protein_id="AHA90776.1"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG
FT KGGSCSQAA"
FT exon <1..73
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=1
FT gap 74..173
FT /estimated_length=unknown
FT exon 174..443
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=2
FT gap 444..543
FT /estimated_length=unknown
FT exon 544..819
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=3
FT gap 820..919
FT /estimated_length=unknown
FT exon 920..1195
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=4
FT gap 1196..1295
FT /estimated_length=unknown
FT exon 1296..1415
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=5
FT gap 1416..1515
FT /estimated_length=unknown
FT exon 1516..>1548
FT /gene="HLA-C"
FT /allele="HLA-C*07:172:02"
FT /number=6
XX
SQ Sequence 1548 BP; 200 A; 332 C; 358 G; 158 T; 500 other;
atgcgggtca tggcgccccg agccctcctc ctgctgctct cgggaggcct ggccctgacc 60
gagacctggg cctnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggggagc cccgcttcat 240
cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc 300
gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga 360
gacacagaag tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgcgcgg 420
ctactacaac cagagcgagg acgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnggtctca caccctccag aggatgtctg gctgcgacct ggggcccgac gggcgcctcc 600
tccgcgggta tgaccagtcc gcctacgacg gcaaggatta catcgccctg aacgaggacc 660
tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg 720
cccgtgcggc ggagcagctg agagcctacc tggagggcac gtgcgtggag tggctccgca 780
gatacctgga gaacgggaag gagacgctgc agcgcgcagn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna acccccaaag acacacgtga cccaccaccc cctctctgac 960
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020
tggcagcggg atggggagga ccagacccag gacaccgagc ttgtggagac caggccagca 1080
ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaca agagcagaga 1140
tacacgtgcc atatgcagca cgaggggctg caagagcccc tcaccctgag ctgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagcca tcttcccagc ccaccatccc 1320
catcatgggc atcgttgctg gcctggctgt cctggttgtc ctagctgtcc ttggagctgt 1380
ggtcaccgct atgatgtgta ggaggaagag ctcagnnnnn nnnnnnnnnn nnnnnnnnnn 1440
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500
nnnnnnnnnn nnnnngtgga aaaggaggga gctgctctca ggctgcgt 1548
//