ID KF527751; SV 1; linear; genomic DNA; STD; HUM; 1548 BP.
XX
AC KF527751;
XX
DT 27-NOV-2013 (Rel. 119, Created)
DT 19-AUG-2014 (Rel. 121, Last updated, Version 3)
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DE Homo sapiens isolate D11001204 MHC class I antigen (HLA-C) gene,
DE HLA-C*03:231 allele, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1548
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT "95 novel alleles for HLA gene found by BGI in 2011 year";
RL Unpublished.
XX
RN [2]
RP 1-1548
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT ;
RL Submitted (08-AUG-2013) to the INSDC.
RL Healthcare, BGI, Third Floor, BGI Second Building, Beishan Industrial Zone,
RL Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China
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DR MD5; 949ac2ab0461a0a24faeaa84aca6351c.
DR IMGT/HLA; HLA-C*03:231; HLA10588.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1548
FT /organism="Homo sapiens"
FT /isolate="D11001204"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1548
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..1415,
FT 1516..>1548)
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..1415,
FT 1516..>1548)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /product="MHC class I antigen"
FT /note="antigen presenting molecule"
FT /db_xref="GOA:V5NSU4"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:V5NSU4"
FT /protein_id="AHA90737.1"
FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT LRGYYNQSEARSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAA"
FT exon <1..73
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=1
FT gap 74..173
FT /estimated_length=unknown
FT exon 174..443
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=2
FT gap 444..543
FT /estimated_length=unknown
FT exon 544..819
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=3
FT gap 820..919
FT /estimated_length=unknown
FT exon 920..1195
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=4
FT gap 1196..1295
FT /estimated_length=unknown
FT exon 1296..1415
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=5
FT gap 1416..1515
FT /estimated_length=unknown
FT exon 1516..>1548
FT /gene="HLA-C"
FT /allele="HLA-C*03:231"
FT /number=6
XX
SQ Sequence 1548 BP; 204 A; 313 C; 364 G; 167 T; 500 other;
atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60
gagacctggg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttctcca catccgtgtc ctggcccggc cgcggggagc cccgcttcat 240
cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc 300
gagaggggag ccgcgggagc cgtgggtgga gcaggagggg ccggagtatt gggaccggga 360
gacacagaag tacaagcgcc aggcacagac tgaccgagtg agcctgcgga acctgcgcgg 420
ctactacaac cagagcgagg ccannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnggtctca catcatccag aggatgtatg gctgcgacgt ggggcccgac gggcgcctcc 600
tccgcgggta tgaccagtac gcctacgacg gcaaggatta catcgccctg aacgaggatc 660
tgcgctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg 720
cccgtgaggc ggagcagctg agagcctacc tggagggcct gtgcgtggag tggctccgca 780
gatacctgaa gaatgggaag gagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna acacccaaag acacacgtga cccaccatcc cgtctctgac 960
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020
tggcagtggg atggggagga ccaaactcag gacactgagc ttgtggagac caggccagca 1080
ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 1140
tacacgtgcc atgtgcagca cgaggggctg ccggagcccc tcaccctgag atgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagc ccaccatccc 1320
catcgtgggc atcgttgctg gcctggctgt cctggctgtc ctagctgtcc taggagctgt 1380
ggtggctgtt gtgatgtgta ggaggaagag ctcagnnnnn nnnnnnnnnn nnnnnnnnnn 1440
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500
nnnnnnnnnn nnnnngtgga aaaggaggga gctgctctca ggctgcgt 1548
//