ID KF444975; SV 1; linear; genomic DNA; STD; HUM; 1412 BP.
XX
AC KF444975;
XX
DT 18-NOV-2013 (Rel. 118, Created)
DT 22-NOV-2013 (Rel. 118, Last updated, Version 2)
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DE Homo sapiens isolate D11048685 MHC class I antigen (HLA-B) gene,
DE HLA-B*39:85 allele, exons 1 through 5 and partial cds.
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1412
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT "55 novel alleles for HLA-B gene found by BGI in 2011 year";
RL Unpublished.
XX
RN [2]
RP 1-1412
RA Qu J., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J., Yang X., Zhou M.,
RA Zeng H., Lan Z.;
RT ;
RL Submitted (24-JUL-2013) to the INSDC.
RL Healthcare, BGI, Third Floor BGI Second Building Beishan Industrial Zone
RL Beishan Beishan Roadyantian District, Shenzhen, Guangdong 518083, China
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DR MD5; e8ec6d05fc79dbb1dcdd30b55d702bbf.
DR IMGT/HLA; HLA-B*39:85; HLA10480.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1412
FT /organism="Homo sapiens"
FT /isolate="D11048685"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1412
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..>1412)
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..>1412)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /product="MHC class I antigen"
FT /db_xref="GOA:U6BN44"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:U6BN44"
FT /protein_id="AHA37296.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT FISVGYVDDTQFLRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN
FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSS"
FT exon <1..73
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /number=1
FT gap 74..173
FT /estimated_length=unknown
FT exon 174..443
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /number=2
FT gap 444..543
FT /estimated_length=unknown
FT exon 544..819
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /number=3
FT gap 820..919
FT /estimated_length=unknown
FT exon 920..1195
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /number=4
FT gap 1196..1295
FT /estimated_length=unknown
FT exon 1296..>1412
FT /gene="HLA-B"
FT /allele="HLA-B*39:85"
FT /number=5
XX
SQ Sequence 1412 BP; 206 A; 317 C; 332 G; 157 T; 400 other;
atgctggtca tggcgccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc 60
gagacctggg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttctaca cctccgtgtc ccggcccggc cgcggggagc cccgcttcat 240
ctcagtgggc tacgtggacg acacgcagtt cctgaggttc gacagcgacg ccgcgagtcc 300
gagagaggag ccgcgggcgc cgtggataga gcaggagggg ccggaatatt gggaccggaa 360
cacacagatc tgcaagacca acacacagac tgaccgagag agcctgcgga acctgcgcgg 420
ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnggtctca caccctccag aggatgtacg gctgcgacgt ggggccggac gggcgcctcc 600
tccgcgggca taaccagttc gcctacgacg gcaaggatta catcgccctg aacgaggacc 660
tgagctcctg gaccgcggcg gacaccgcgg ctcagatcac ccagcgcaag tgggaggcgg 720
cccgtgtggc ggagcagctg agaacctacc tggagggcac gtgcgtggag tggctccgca 780
gatacctgga gaacgggaag gagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna ccccccaaag acacatgtga cccaccaccc catctctgac 960
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020
tggcagcggg atggcgagga ccaaactcag gacaccgagc ttgtggagac cagaccagca 1080
ggagacagaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 1140
tacacatgcc atgtacagca tgaggggctg ccgaagcccc tcaccctgag atgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagcca tcttcccagt ccaccgtccc 1320
catcgtgggc attgttgctg gcctggctgt cctagcagtt gtggtcatcg gagctgtggt 1380
cgctgctgtg atgtgtagga ggaagagttc ag 1412
//