ID KF418603; SV 1; linear; genomic DNA; STD; HUM; 1412 BP.
XX
AC KF418603;
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DT 14-NOV-2013 (Rel. 118, Created)
DT 22-NOV-2013 (Rel. 118, Last updated, Version 2)
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DE Homo sapiens isolate D11002621 MHC class I antigen (HLA-A) gene,
DE HLA-A*30:79 allele, exons 1 through 5 and partial cds.
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1412
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT "66 novel alleles for HLA-A gene found by BGI in 2011 year";
RL Unpublished.
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RN [2]
RP 1-1412
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT ;
RL Submitted (15-JUL-2013) to the INSDC.
RL Healthcare, Bgi, Third Floor Bgi Second Building Beishan Industrial Zone
RL Beishan Beishan Roadyantian District, Shenzhen, Guangdong 518083, China
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DR MD5; 43fe5dabf4e2134b9d89641b7642fcf2.
DR IMGT/HLA; HLA-A*30:79; HLA10452.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1412
FT /organism="Homo sapiens"
FT /isolate="D11002621"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1412
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..>1412)
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..>1412)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /product="MHC class I antigen"
FT /note="antigen presenting molecule"
FT /db_xref="GOA:U5YMJ8"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:U5YMJ8"
FT /protein_id="AGZ92846.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYLSTSVSRPGSGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAQSQTDRVDLGT
FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMA
FT AQITQRKWEAARWAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSS"
FT exon 1..73
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /number=1
FT gap 74..173
FT /estimated_length=unknown
FT exon 174..443
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /number=2
FT gap 444..543
FT /estimated_length=unknown
FT exon 544..819
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /number=3
FT gap 820..919
FT /estimated_length=unknown
FT exon 920..1195
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /number=4
FT gap 1196..1295
FT /estimated_length=unknown
FT exon 1296..1412
FT /gene="HLA-A"
FT /allele="HLA-A*30:79"
FT /number=5
XX
SQ Sequence 1412 BP; 198 A; 309 C; 341 G; 164 T; 400 other;
atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 60
cagacctggg cggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttatcca catccgtgtc ccggcccggc agtggagagc cccgcttcat 240
cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca 300
gaggatggag ccgcgggcgc cgtggataga gcaggagagg cctgagtatt gggaccagga 360
gacacggaat gtgaaggccc agtcacagac tgaccgagtg gacctgggga ccctgcgcgg 420
ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnngttctca caccatccag ataatgtatg gctgcgacgt ggggtcggac gggcgcttcc 600
tccgcgggta tgaacagcac gcctacgacg gcaaggatta catcgccctg aacgaggacc 660
tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg 720
cccgttgggc ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca 780
gatacctgga gaacgggaag gagacgctgc agcgcacggn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna cccccccaag acacatatga cccaccaccc catctctgac 960
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020
tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca 1080
ggggatggaa ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga 1140
tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag atgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagctg tcttcccagc ccaccatccc 1320
catcgtgggc atcattgctg gcctggttct ccttggagct gtgatcactg gagctgtggt 1380
cgctgccgtg atgtggagga ggaagagctc ag 1412
//