ID KF280209; SV 1; linear; genomic DNA; STD; HUM; 652 BP.
XX
AC KF280209;
XX
DT 21-JUL-2013 (Rel. 117, Created)
DT 21-JUL-2013 (Rel. 117, Last updated, Version 1)
XX
DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06 allele,
DE exons 2, 3 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-652
RA Sunkur P., Niokou D., Goburdhun Z., Patel R., Brown C.;
RT "A novel HLA-DQB1*06 allele";
RL Unpublished.
XX
RN [2]
RP 1-652
RA Sunkur P., Niokou D., Goburdhun Z., Patel R., Brown C.;
RT ;
RL Submitted (11-JUN-2013) to the INSDC.
RL H&I, NHSBT, Charcot Road, Colindale, London NW9 5BG, UK
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DR MD5; 743aa3944dbf18ca47bc216e52127f49.
DR IMGT/HLA; HLA-DQB1*06:110; HLA10113.
XX
CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..652
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>652
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06"
FT mRNA join(<1..270,371..>652)
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06"
FT /product="MHC class II antigen"
FT CDS join(<1..270,371..>652)
FT /codon_start=3
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06"
FT /product="MHC class II antigen"
FT /db_xref="GOA:S5GDK0"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="UniProtKB/TrEMBL:S5GDK0"
FT /protein_id="AGQ53943.1"
FT /translation="DFVYQFKGMCYFTNGTERVRLVTRHIYNREEYARFDSDVGVYRAV
FT TPQGRPDAEYWNSQKEVLEGTRAELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEAL
FT NHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRE
FT DVYTCHVEHPSLQSPITVEW"
FT exon 1..270
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..652
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06"
FT /number=3
XX
SQ Sequence 652 BP; 123 A; 155 C; 173 G; 101 T; 100 other;
aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggacg gagcgcgtgc 60
gtcttgtaac cagacacatc tataaccgag aggagtacgc gcgcttcgac agcgacgtgg 120
gggtgtaccg cgcggtgacg ccgcaggggc ggcctgatgc cgagtactgg aacagccaga 180
aggaagtcct ggaggggacc cgggcggagt tggacacggt gtgcagacac aactacgagg 240
tggcgttccg cgggatcttg cagaggagag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac 420
cacaacctgc tggtctgctc ggtgacagat ttctatccag gccagatcaa agtccggtgg 480
tttcggaatg atcaggagga gacagccggc gttgtgtcca ccccccttat taggaatggt 540
gactggactt tccagatcct ggtgatgctg gaaatgactc cccagcgtga agatgtctac 600
acctgccacg tggagcaccc cagcctccag agccccatca ccgtggagtg gc 652
//