ID KF175443; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC KF175443;
XX
DT 15-JUL-2013 (Rel. 117, Created)
DT 22-NOV-2013 (Rel. 118, Last updated, Version 2)
XX
DE Homo sapiens isolate D10059708 MHC class I antigen (HLA-C) gene,
DE HLA-C*06:02:28 allele, exons 2 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT "HLA-C novel alleles found by BGI in 2010 year";
RL Unpublished.
XX
RN [2]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT ;
RL Submitted (30-MAY-2013) to the INSDC.
RL Healthcare, BGI, third floor BGI second building Beishan industrial Zone
RL Beishan Beishan RoadYantian District, Shenzhen, Guangdong 518083, China
XX
DR MD5; f353076d2281cef9f6f837196f051a0f.
DR IMGT/HLA; HLA-C*06:02:28; HLA09975.
XX
CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /isolate="D10059708"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1022
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:S5DLE2"
FT /protein_id="AGQ16938.1"
FT /translation="SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGCDLGP
FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTC
FT VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..646
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT /number=3
FT gap 647..746
FT /estimated_length=unknown
FT exon 747..1022
FT /gene="HLA-C"
FT /allele="HLA-C*06:02:28"
FT /number=4
XX
SQ Sequence 1022 BP; 172 A; 252 C; 287 G; 111 T; 200 other;
gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccc cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagtgg atgtatggct gcgacctggg gcccgacggg 420
cgactcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480
gaggacctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagtggaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca ccctgagatg 1020
gg 1022
//