ID KF175395; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC KF175395;
XX
DT 15-JUL-2013 (Rel. 117, Created)
DT 22-NOV-2013 (Rel. 118, Last updated, Version 2)
XX
DE Homo sapiens isolate D10066432 MHC class I antigen (HLA-C) gene,
DE HLA-C*01:80 allele, exons 2 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT "HLA-C novel alleles found by BGI in 2010 year";
RL Unpublished.
XX
RN [2]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT ;
RL Submitted (30-MAY-2013) to the INSDC.
RL Healthcare, BGI, third floor BGI second building Beishan industrial Zone
RL Beishan Beishan RoadYantian District, Shenzhen, Guangdong 518083, China
XX
DR MD5; e77b3f9860534634be33e59276ce7223.
DR IMGT/HLA; HLA-C*01:80; HLA09944.
XX
CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /isolate="D10066432"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1022
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:S5DL69"
FT /protein_id="AGQ16893.1"
FT /translation="SHSMKYFFTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGG
FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMCGCDLGP
FT DGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED
FT QTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..646
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT /number=3
FT gap 647..746
FT /estimated_length=unknown
FT exon 747..1022
FT /gene="HLA-C"
FT /allele="HLA-C*01:80"
FT /number=4
XX
SQ Sequence 1022 BP; 169 A; 251 C; 287 G; 115 T; 200 other;
gctcccactc catgaagtat ttcttcacat ccgtgtcccg gcctggccgc ggagagcccc 60
gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggggccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagtgg atgtgtggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggtatga ccagtacgcc tacgacggca aggattacat cgccctgaac 480
gaggacctgc gctcctggac cgccgcggac accgcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagcggaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg atggtgcctt ctggagaaga 960
gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca ccctgagatg 1020
gg 1022
//