Dbfetch
ID KF028617; SV 2; linear; genomic DNA; STD; HUM; 1641 BP.
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AC KF028617;
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DT 01-SEP-2013 (Rel. 118, Created)
DT 16-JAN-2015 (Rel. 123, Last updated, Version 2)
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DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*57:01:01variant
DE allele, partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1641
RA Lazaro A.M., Chen M., Hurley C.K.;
RT "Novel HLA class I allele";
RL Unpublished.
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RN [2]
RP 1-1641
RA Lazaro A.M., Chen M., Hurley C.K.;
RT ;
RL Submitted (10-MAY-2013) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
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RN [3]
RC Sequence update by submitter
RP 1-1641
RA Lazaro A.M., Chen M., Hurley C.K.;
RT ;
RL Submitted (15-JAN-2015) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
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DR MD5; a8a48d8e43c7a949e7df67fbc19634a2.
DR IMGT/HLA; HLA-B*57:01:21; HLA12884.
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CC On Jan 15, 2015 this sequence version replaced gi:533113721.
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FH Key Location/Qualifiers
FH
FT source 1..1641
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1641
FT /gene="HLA-B"
FT /allele="HLA-B*57:01:01variant"
FT mRNA join(<1..270,516..791,1366..>1641)
FT /gene="HLA-B"
FT /allele="HLA-B*57:01:01variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,516..791,1366..>1641)
FT /codon_start=3
FT /gene="HLA-B"
FT /allele="HLA-B*57:01:01variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:T1WF39"
FT /protein_id="AGU13628.2"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMA
FT PRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGP
FT DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLC
FT VEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..515
FT /estimated_length=245
FT gap 792..1365
FT /estimated_length=574
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SQ Sequence 1641 BP; 175 A; 254 C; 276 G; 117 T; 819 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120
cgagtccgag gatggcgccc cgggcgccat ggatagagca ggaggggccg gagtattggg 180
acggggagac acggaacatg aaggcctccg cgcagactta ccgagagaac ctgcggatcg 240
cgctccgcta ctacaaccag agcgaagccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnggtct cacatcatcc aggtgatgta 540
tggctgcgac gtggggccgg acgggcgcct cctccgcggg catgaccagt ccgcctacga 600
cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg cggacacggc 660
ggctcagatc acccagcgca agtgggaggc ggcccgtgtg gcggagcagc tgagagccta 720
cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga aggagacgct 780
gcagcgcgcg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnacccc ccaaagacac 1380
atgtgaccca ccaccccatc tctgaccatg aggccaccct gaggtgctgg gccctgggct 1440
tctaccctgc ggagatcaca ctgacctggc agcgggatgg cgaggaccaa actcaggaca 1500
ccgagcttgt ggagaccaga ccagcaggag atagaacctt ccagaagtgg gcagctgtgg 1560
tggtgccttc tggagaagag cagagataca catgccatgt acagcatgag gggctgccaa 1620
agcccctcac cctgagatgg g 1641
//