Dbfetch
ID KC801947; SV 2; linear; genomic DNA; STD; HUM; 1663 BP.
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AC KC801947;
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DT 15-JUL-2013 (Rel. 117, Created)
DT 16-JAN-2015 (Rel. 123, Last updated, Version 2)
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DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*33:03:01 variant
DE allele, exons 2 through 4 and partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1663
RA Lazaro A.M., Hurley C.K.;
RT ;
RL Submitted (20-MAR-2013) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
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RN [2]
RC Sequence update by submitter
RP 1-1663
RA Lazaro A.M., Hurley C.K.;
RT ;
RL Submitted (15-JAN-2015) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
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DR MD5; b86d4420d142b3bac2ab271e6bcce077.
DR IMGT/HLA; HLA-A*33:03:30; HLA12882.
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CC On Jan 15, 2015 this sequence version replaced gi:521417752.
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FH Key Location/Qualifiers
FH
FT source 1..1663
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1663
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT mRNA join(<1..269,511..787,1388..>1663)
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..269,511..787,1388..>1663)
FT /codon_start=3
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:S5CGR3"
FT /protein_id="AGQ03761.2"
FT /translation="SHSMRYFTTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT PRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGTLRGYYNQSEAGSHTIQMMYGCDVGS
FT DGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARVAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWASVVVPSGQEQRYTCHVQHEGLPKPLTLRW"
FT exon <1..269
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT /number=2
FT gap 270..510
FT /estimated_length=241
FT exon 511..787
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT /number=3
FT gap 788..1387
FT /estimated_length=600
FT exon 1388..1663
FT /gene="HLA-A"
FT /allele="HLA-A*33:03:01 variant"
FT /number=4
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SQ Sequence 1663 BP; 166 A; 249 C; 283 G; 124 T; 841 other;
gctcccactc catgaggtat ttcaccacat ccgtgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagccagag gatggagccg cgggcgccgt ggatagaaca ggaggggccg gagtattggg 180
accggaacac acggaatgtg aaggcccact cacagattga ccgagtggac ctggggaccc 240
tgcgcggcta ctacaaccag agcgaggccn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ggttctcaca ccatccagat gatgtatggc 540
tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc agcaggacgc ctacgacggc 600
aaggattaca tcgccttgaa cgaggacctg cgctcttgga ccgcggcgga catggcggct 660
cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagttgag agcctacctg 720
gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 780
cgcacggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380
nnnnnnnacc cccccaagac gcatatgact caccacgctg tctctgacca tgaggccacc 1440
ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg gcagcgggat 1500
ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg ggatggaacc 1560
ttccagaagt gggcgtctgt ggtggtgcct tctggacagg agcagagata cacctgccat 1620
gtgcagcatg agggtctccc caagcccctc accctgagat ggg 1663
//