Dbfetch

ID   KC801947; SV 2; linear; genomic DNA; STD; HUM; 1663 BP.
XX
AC   KC801947;
XX
DT   15-JUL-2013 (Rel. 117, Created)
DT   16-JAN-2015 (Rel. 123, Last updated, Version 2)
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DE   Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*33:03:01 variant
DE   allele, exons 2 through 4 and partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1663
RA   Lazaro A.M., Hurley C.K.;
RT   ;
RL   Submitted (20-MAR-2013) to the INSDC.
RL   Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL   20057, USA
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RN   [2]
RC   Sequence update by submitter
RP   1-1663
RA   Lazaro A.M., Hurley C.K.;
RT   ;
RL   Submitted (15-JAN-2015) to the INSDC.
RL   Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL   20057, USA
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DR   MD5; b86d4420d142b3bac2ab271e6bcce077.
DR   IMGT/HLA; HLA-A*33:03:30; HLA12882.
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CC   On Jan 15, 2015 this sequence version replaced gi:521417752.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1663
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1663
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT   mRNA            join(<1..269,511..787,1388..>1663)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..269,511..787,1388..>1663)
FT                   /codon_start=3
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:S5CGR3"
FT                   /protein_id="AGQ03761.2"
FT                   /translation="SHSMRYFTTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGTLRGYYNQSEAGSHTIQMMYGCDVGS
FT                   DGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARVAEQLRAYLEGTC
FT                   VEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDGTFQKWASVVVPSGQEQRYTCHVQHEGLPKPLTLRW"
FT   exon            <1..269
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT                   /number=2
FT   gap             270..510
FT                   /estimated_length=241
FT   exon            511..787
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT                   /number=3
FT   gap             788..1387
FT                   /estimated_length=600
FT   exon            1388..1663
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*33:03:01 variant"
FT                   /number=4
XX
SQ   Sequence 1663 BP; 166 A; 249 C; 283 G; 124 T; 841 other;
     gctcccactc catgaggtat ttcaccacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagag gatggagccg cgggcgccgt ggatagaaca ggaggggccg gagtattggg       180
     accggaacac acggaatgtg aaggcccact cacagattga ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ggttctcaca ccatccagat gatgtatggc       540
     tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc agcaggacgc ctacgacggc       600
     aaggattaca tcgccttgaa cgaggacctg cgctcttgga ccgcggcgga catggcggct       660
     cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagttgag agcctacctg       720
     gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag       780
     cgcacggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnacc cccccaagac gcatatgact caccacgctg tctctgacca tgaggccacc      1440
     ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg gcagcgggat      1500
     ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg ggatggaacc      1560
     ttccagaagt gggcgtctgt ggtggtgcct tctggacagg agcagagata cacctgccat      1620
     gtgcagcatg agggtctccc caagcccctc accctgagat ggg                        1663
//