Dbfetch

Dbfetch

ID   KC684423; SV 1; linear; genomic DNA; STD; HUM; 857 BP.
XX
AC   KC684423;
XX
DT   26-MAY-2013 (Rel. 116, Created)
DT   26-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Homo sapiens MHC class II antigen (HLA-DPB1) gene, HLA-DPB1*01new allele,
DE   partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-857
RA   Testi M.;
RT   "Identification of a new DPB1*01:01 allele by sequence-based typing";
RL   Unpublished.
XX
RN   [2]
RP   1-857
RA   Testi M.;
RT   ;
RL   Submitted (21-FEB-2013) to the INSDC.
RL   Tor Vergata Hospital, LIBT Fondazione IME, viale Oxford 81, Rome, RM 00133,
RL   Italy
XX
DR   MD5; b368c0985018fd2638fcc9b69a57a62c.
DR   IMGT/HLA; HLA-DPB1*162:01:01; HLA09478.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..857
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>857
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*01new"
FT   mRNA            join(<1..264,365..646,747..>857)
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*01new"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..264,365..646,747..>857)
FT                   /codon_start=3
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*01new"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:R4TPV8"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:R4TPV8"
FT                   /protein_id="AGM15309.1"
FT                   /translation="NYVYQGRQECYAFNGTQRFLERYIYNREEYARFDSDVGEFRAVTE
FT                   LGRPAAEYWNSQKDILEEKRAVPDRVCRHNYELDEAVTLQRRVQPRVNVSPSKKGPLQH
FT                   HNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDV
FT                   YTCQVEHTSLDSPVTVEWKAQSDSARSKTLTGAGGFVLGLIICGVGIFMHRRSKK"
FT   gap             265..364
FT                   /estimated_length=unknown
FT   gap             647..746
FT                   /estimated_length=unknown
XX
SQ   Sequence 857 BP; 154 A; 170 C; 216 G; 117 T; 200 other;
     agaattacgt gtaccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc        60
     tggagagata catctacaac cgggaggagt acgcgcgctt cgacagcgac gtgggagagt       120
     tccgggcggt gacggagctg gggcggcctg ctgcggagta ctggaacagc cagaaggaca       180
     tcctggagga gaagcgggca gtgccggaca gggtatgcag acacaactac gagctggacg       240
     aggccgtgac cctgcagcgc cgagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnntccagc ctagggtgaa tgtttccccc tccaagaagg ggcccttgca gcaccacaac       420
     ctgcttgtct gccacgtgac ggatttctac ccaggcagca ttcaagtccg atggttcctg       480
     aatggacagg aggaaacagc tggggtcgtg tccaccaacc tgatccgtaa tggagactgg       540
     accttccaga tcctggtgat gctggaaatg accccccagc agggagatgt ctacacctgc       600
     caagtggagc acaccagcct ggatagtcct gtcaccgtgg agtggannnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnaggc acagtctgat tctgcccgga gtaagacatt       780
     gacgggagct gggggcttcg tgctggggct catcatctgt ggagtgggca tcttcatgca       840
     caggaggagc aagaaag                                                      857
//