ID JX669878; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC JX669878;
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DT 18-NOV-2012 (Rel. 114, Created)
DT 01-MAY-2014 (Rel. 120, Last updated, Version 3)
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DE Homo sapiens isolate 5711102129 MHC class I antigen gene, partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1022
RX DOI; 10.1111/tan.12178.
RX PUBMED; 24032729.
RA Wang W., He J., Zhang W., Zhu F.M., Lv H.J.;
RT "A novel HLA allele, HLA-B*40:227, was identified by polymerase chain
RT reaction sequence-based typing in a Chinese individual";
RL Tissue Antigens 82(3):208-209(2013).
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RN [2]
RP 1-1022
RA Zhu F., Zhang W., Wang W.;
RT ;
RL Submitted (11-SEP-2012) to the INSDC.
RL HLA Laboratory, Transfusion Institute, Blood Center of Zhejiang Province,
RL Wulin Road 345, Hangzhou, Zhejiang 310006, China
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DR MD5; 9fc9ea65d93170d4b53aefdaa1f286f4.
DR IMGT/HLA; HLA-B*40:227; HLA08879.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /isolate="5711102129"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT mRNA join(<1..270,371..646,747..>1022)
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:K7X3R1"
FT /protein_id="AFW98274.1"
FT /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT PRAPWIEQEGPEYWDRETEISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYGCDVGP
FT DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAYLEGEC
FT VEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
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SQ Sequence 1022 BP; 181 A; 254 C; 272 G; 115 T; 200 other;
gctcccactc catgaggtat ttccacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcac cgtgggctac gtggacgaca cgctgttcgt gaggttcgac agcgacgcca 120
cgagtccgag gaaggagccg cgggcgccat ggatagagca ggaggggccg gagtattggg 180
accgggagac agagatctcc aagaccaaca cacagactta ccgagagagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtacggct gcgacgtggg gccggacggg 420
cgcctcctcc gcgggcataa ccagtacgcc tacgacggca aggattacat cgccctgaac 480
gaggacctgc gctcctggac cgccgcggac acggcggctc agatctccca gcgcaagttg 540
gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcgagtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggac aagctggagc gcgctgnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccat 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggt ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900
accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020
gg 1022
//