Dbfetch

Dbfetch

ID   JX523655; SV 1; linear; genomic DNA; STD; HUM; 1349 BP.
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AC   JX523655;
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DT   01-SEP-2013 (Rel. 118, Created)
DT   31-MAR-2018 (Rel. 136, Last updated, Version 3)
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DE   Homo sapiens killer cell immunoglobulin-like receptor three domains
DE   pseudogene 1 (KIR3DP1) pseudogene, KIR3DP1-SA052 allele, partial sequence.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1349
RX   DOI; 10.1186/1471-2164-15-262.
RX   PUBMED; 24708091.
RA   Kidd J.M., Sharpton T.J., Bobo D., Norman P.J., Martin A.R.,
RA   Carpenter M.L., Sikora M., Gignoux C.R., Nemat-Gorgani N., Adams A.,
RA   Guadalupe M., Guo X., Feng Q., Li Y., Liu X., Parham P., Hoal E.G.,
RA   Feldman M.W., Pollard K.S., Wall J.D., Bustamante C.D., Henn B.M.;
RT   "Exome capture from saliva produces high quality genomic and metagenomic
RT   data";
RL   BMC Genomics 15(1):262-262(2014).
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RN   [2]
RC   Publication Status: Online-Only DOI: 10.4049/jimmunol.1701780
RP   1-1349
RA   Nemat-Gorgani N., Hilton H.G., Henn B.M., Lin M., Gignoux C.R.,
RA   Myrick J.W., Werely C.J., Granka J.M., Moeller M., Hoal E.G., Yawata M.,
RA   Yawata N., Boelen L., Asquith B., Parham P., Norman P.J.;
RT   "Different Selected Mechanisms Attenuated the Inhibitory Interaction of
RT   KIR2DL1 with C2+HLA-C in Two Indigenous Human Populations in Southern
RT   Africa";
RL   J. Immunol. ji:1701780-1701780(2018).
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RN   [3]
RP   1-1349
RA   Norman P.J., Nemat-Gorgani N., Henn B.M., Parham P.;
RT   ;
RL   Submitted (17-AUG-2012) to the INSDC.
RL   Structural Biology, Stanford University School of Medicine, 299 Campus
RL   Drive West, Stanford, CA 94305, USA
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DR   MD5; febd75b2e4c765bfa604e8f32220eba5.
DR   EuropePMC; PMC5990024; 29549179.
DR   IPD-KIR; KIR3DP1*012; KIR00700.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: MIRA v. 3.4; Bowtie v. 0.12.7
CC   Sequencing Technology :: Sanger dideoxy sequencing; Illumina
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1349
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            1..>1349
FT                   /gene="KIR3DP1"
FT                   /allele="SA052"
FT                   /note="killer cell immunoglobulin-like receptor three
FT                   domains pseudogene 1"
FT                   /pseudogene="unknown"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             171..270
FT                   /estimated_length=unknown
FT   gap             548..647
FT                   /estimated_length=unknown
FT   gap             956..1055
FT                   /estimated_length=unknown
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SQ   Sequence 1349 BP; 195 A; 283 C; 242 G; 229 T; 400 other;
     atgtcgctca tggtcgtcag catggcgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnggttct tcttgctgca gggggcctgg acacatgagg nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gtggtcagga caagcccttc ctctctgcct       300
     ggcccagccc tgtggtgtct gaaggagaac atgtggctct tcagtgtcgc tctcgtcttg       360
     ggtttaacga attcagtctg tccaaagaag acgggatgcc tgtccctgag ctctacaaca       420
     gagtattccg aaacaccgtt ttcataggcc ctgtgacccc agcacatgca gggacctaca       480
     gatgtcgggg ttcacaccca cacttcctca ctgggtggtc agcacccagc aaccccctgg       540
     tgatcatnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnggt cacaggagtc       660
     cacagaaaac cttccctcct ggcccaccca ggtcccctgg tgaaatcaga agagacagtc       720
     atcctgcaat gttggtcaga tgtcatgttt gaacacttcc ttctgcacag agaggggaag       780
     tttaatgaca ctttgcgcct cactggagag ctccatgatg gggtctccaa ggccaacttc       840
     tccatcggtc gcatgacgca agaccttgca gggacctaca gatgctacgg ttctgttcct       900
     cattccccct atcagttgtc agctcccagt gaccctctgg acatcgtgat tacagnnnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngtcta tgtgggaaac cttctctctc      1080
     agcccagccg tgccccatgg ttaaggcagg agagagcgtg accttgtcct gcagctcccg      1140
     gagctcctat gacatctacc atctatcaag ggagggggag gctcatgaac ttaggttccc      1200
     tgcagtgccc aaggtcaatg gaaccttcca ggccaacttt cctctgggcc ctgccaccca      1260
     cggagggacc tacagatgct tcggctcttt ccgtgactct ccctacgagt ggtcagacct      1320
     tagtgaccca ctgcttgttt ctgtcacag                                        1349
//