Dbfetch

ID   JX523640; SV 1; linear; genomic DNA; STD; HUM; 1615 BP.
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AC   JX523640;
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DT   01-SEP-2013 (Rel. 118, Created)
DT   31-MAR-2018 (Rel. 136, Last updated, Version 3)
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DE   Homo sapiens killer cell immunoglobulin-like receptor two domains short
DE   cytoplasmic tail 3 (KIR2DS3) gene, KIR2DS3-SA006 allele, complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1615
RX   DOI; 10.1186/1471-2164-15-262.
RX   PUBMED; 24708091.
RA   Kidd J.M., Sharpton T.J., Bobo D., Norman P.J., Martin A.R.,
RA   Carpenter M.L., Sikora M., Gignoux C.R., Nemat-Gorgani N., Adams A.,
RA   Guadalupe M., Guo X., Feng Q., Li Y., Liu X., Parham P., Hoal E.G.,
RA   Feldman M.W., Pollard K.S., Wall J.D., Bustamante C.D., Henn B.M.;
RT   "Exome capture from saliva produces high quality genomic and metagenomic
RT   data";
RL   BMC Genomics 15(1):262-262(2014).
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RN   [2]
RC   Publication Status: Online-Only DOI: 10.4049/jimmunol.1701780
RP   1-1615
RA   Nemat-Gorgani N., Hilton H.G., Henn B.M., Lin M., Gignoux C.R.,
RA   Myrick J.W., Werely C.J., Granka J.M., Moeller M., Hoal E.G., Yawata M.,
RA   Yawata N., Boelen L., Asquith B., Parham P., Norman P.J.;
RT   "Different Selected Mechanisms Attenuated the Inhibitory Interaction of
RT   KIR2DL1 with C2+HLA-C in Two Indigenous Human Populations in Southern
RT   Africa";
RL   J. Immunol. ji:1701780-1701780(2018).
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RN   [3]
RP   1-1615
RA   Norman P.J., Nemat-Gorgani N., Henn B.M., Parham P.;
RT   ;
RL   Submitted (17-AUG-2012) to the INSDC.
RL   Structural Biology, Stanford University School of Medicine, 299 Campus
RL   Drive West, Stanford, CA 94305, USA
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DR   MD5; 4c2588bc10ac96632183a40675acf185.
DR   EuropePMC; PMC5990024; 29549179.
DR   IPD-KIR; KIR2DS3*007; KIR00699.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: MIRA v. 3.4; Bowtie v. 0.12.7
CC   Sequencing Technology :: Sanger dideoxy sequencing; Illumina
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1615
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1615
FT                   /gene="KIR2DS3"
FT                   /allele="SA006"
FT   mRNA            join(<1..34,135..169,270..570,671..964,1065..1115,
FT                   1216..1320,1421..1473,1574..>1615)
FT                   /gene="KIR2DS3"
FT                   /allele="SA006"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains short cytoplasmic tail 3"
FT   CDS             join(1..34,135..169,270..570,671..964,1065..1115,
FT                   1216..1320,1421..1473,1574..1615)
FT                   /codon_start=1
FT                   /gene="KIR2DS3"
FT                   /allele="SA006"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains short cytoplasmic tail 3"
FT                   /protein_id="AFQ98431.1"
FT                   /translation="MSLMVISMACVAFFWLQGAWPHEGFRRKPSLLAHPGRLVKSEETV
FT                   ILQCWSDVMFEHFLLHREGTFNDTLRLIGEHIDGVSKANFSIGRMRQDLAGTYRCYGSV
FT                   PHSPYQFSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSWSSYDMYHLSTE
FT                   GEAHERRFSAGPKVNGTFQADFPLGPATQGGTYRCFGSFHDSPYEWSKSSDPLLVSVTG
FT                   NPSNSWPSPTEPSSETGNPRHLHVLIGTSVVKLPFTILLFFLLHRWCSDKKNASVMDQG
FT                   PAGNRTVNREDSDEQDHQEVSYA"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             170..269
FT                   /estimated_length=unknown
FT   gap             571..670
FT                   /estimated_length=unknown
FT   gap             965..1064
FT                   /estimated_length=unknown
FT   gap             1116..1215
FT                   /estimated_length=unknown
FT   gap             1321..1420
FT                   /estimated_length=unknown
FT   gap             1474..1573
FT                   /estimated_length=unknown
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SQ   Sequence 1615 BP; 209 A; 271 C; 224 G; 211 T; 700 other;
     atgtcgctca tggtcatcag catggcatgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnncgttct tctggctgca gggggcctgg ccacatgagn nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnng gattccgcag aaaaccttcc ctcctggccc       300
     acccaggtcg cctggtgaaa tcagaagaga cagtcatcct gcaatgttgg tcagatgtca       360
     tgtttgagca cttccttctg cacagagagg ggacgtttaa cgacactttg cgcctcattg       420
     gagagcacat tgatggggtc tccaaggcca acttctccat cggtcgcatg aggcaagacc       480
     tggcagggac ctacagatgc tacggttctg ttcctcactc cccctatcag ttttcagctc       540
     ccagtgaccc tctggacatc gtgatcacag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn gtctatatga gaaaccttct ctctcagccc agccgggccc cacggttctg       720
     gcaggagaga gcgtgacctt gtcctgcagc tcctggagct cctatgacat gtaccatcta       780
     tccacggagg gggaggccca tgaacgtagg ttctctgcag ggcccaaggt caacggaaca       840
     ttccaggccg actttcctct gggccctgcc acccaaggag gaacctacag atgcttcggc       900
     tctttccatg actctcccta cgagtggtca aagtcaagtg acccactgct tgtttctgtc       960
     acagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngaaacc cttcaaatag      1080
     ttggccttca cccactgaac caagctccga aaccgnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnngtaac cccagacacc tacacgttct gattgggacc tcagtggtca      1260
     aactcccttt caccatcctc ctcttctttc tccttcatcg ctggtgctcc gacaaaaaaa      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn atgcatctgt aatggaccaa      1440
     gggcctgcgg ggaacagaac agtgaacagg gagnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1560
     nnnnnnnnnn nnngattctg atgaacagga ccatcaggag gtgtcatacg cataa           1615
//