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EBI Dbfetch

ID   JF430869; SV 1; linear; genomic DNA; STD; HUM; 863 BP.
XX
AC   JF430869;
XX
DT   21-JUN-2011 (Rel. 109, Created)
DT   27-APR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Homo sapiens MHC class II antigen (HLA-DRB1) gene, HLA-DRB1*04:98 allele,
DE   partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-863
RX   DOI; 10.1111/j.1399-0039.2011.01740.x.
RX   PUBMED; 21762398.
RA   Balas A., Sanchez-Gordo F., Garcia-Sanchez F., Prat I., Vicario J.L.;
RT   "Sequencing of a new HLA-DRB1*04:98 allele in a Spanish donor";
RL   Tissue Antigens 78(6):462-463(2011).
XX
RN   [2]
RP   1-863
RA   Balas A., Sanchez-Gordo F., Vicario J.L.;
RT   ;
RL   Submitted (25-FEB-2011) to the INSDC.
RL   Histocompatibility, Regional Transfusion Centre of Madrid, Avenida de la
RL   Democracia s/n, Madrid 28032, Spain
XX
DR   MD5; aff4ef25bb9fceaaa9fcf600793264fd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..863
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>863
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*04:98"
FT   mRNA            join(<1..270,371..652,753..>863)
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*04:98"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..652,753..>863)
FT                   /codon_start=3
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*04:98"
FT                   /product="MHC class II antigen"
FT                   /note="HLA-DR"
FT                   /db_xref="GOA:F8TVY1"
FT                   /db_xref="IMGT/HLA:DRB1*04:98:01"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="UniProtKB/TrEMBL:F8TVY1"
FT                   /protein_id="AEH95569.1"
FT                   /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAV
FT                   TELGRPDAEYWNSQKDLLEQKRGRVDTYCRHNYGVGESFTVQRRVYPEVTVYPAKTQPL
FT                   QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQK"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   gap             653..752
FT                   /estimated_length=unknown
XX
SQ   Sequence 863 BP; 147 A; 167 C; 217 G; 132 T; 200 other;
     cacgtttctt ggagcaggtt aaacatgagt gtcatttctt caacgggacg gagcgggtgc        60
     ggttcctgga cagatacttc tatcaccaag aggagtacgt gcgcttcgac agcgacgtgg       120
     gggagtaccg ggcggtgacg gagctggggc ggcctgatgc cgagtactgg aacagccaga       180
     aggacctcct ggagcagaag cggggccgcg tggacaccta ctgcagacac aactacgggg       240
     ttggtgagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tctatcctga ggtgactgtg tatcctgcaa agacccagcc cctgcagcac       420
     cacaacctcc tggtctgctc tgtgaatggt ttctatccag gcagcattga agtcaggtgg       480
     ttccggaacg gccaggaaga gaagactggg gtggtgtcca caggcctgat ccagaatgga       540
     gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac       600
     acctgccaag tggagcaccc aagcctgacg agccctctca cagtggaatg gannnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngagcacgg tctgaatctg cacagagcaa       780
     gatgctgagt ggagtcgggg gcttcgtgct gggcctgctc ttccttgggg ccgggctgtt       840
     catctacttc aggaatcaga aag                                               863
//


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