Dbfetch
ID J00203; SV 1; linear; genomic DNA; STD; HUM; 2293 BP. XX AC J00203; XX DT 13-JUN-1985 (Rel. 06, Created) DT 17-JUN-2008 (Rel. 96, Last updated, Version 7) XX DE Human HLA-DR alpha-chain (chain-p34) gene, exon 1. XX KW antigen; B-cell histocompatibility gene structure; class II antigen; KW histocompatibility antigen; immunoglobulin-like sequence; repeat region. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2293 RX DOI; 10.1073/pnas.80.12.3543. RX PUBMED; 6304715. RA Das H.K., Lawrance S.K., Weissman S.M.; RT "Structure and nucleotide sequence of the heavy chain gene of HLA-DR"; RL Proc. Natl. Acad. Sci. U.S.A. 80(12):3543-3547(1983). XX RN [2] RP 1-2293 RA Das H.K., Lawrance S.K., Weissman S.M.; RT "Structure and nucleotide sequence of the heavy chain gene of HLA-DR"; RL Proc. Natl. Acad. Sci. U.S.A. 80:7024-7024(1983). XX DR MD5; 3ae86fb397a3c5d787ade7d4fb80325c. DR EPD; EP07121; HS_HLA-DRA. DR Ensembl-Gn; ENSG00000204287; homo_sapiens. DR Ensembl-Gn; ENSG00000206308; homo_sapiens. DR Ensembl-Gn; ENSG00000226260; homo_sapiens. DR Ensembl-Gn; ENSG00000227993; homo_sapiens. DR Ensembl-Gn; ENSG00000228987; homo_sapiens. DR Ensembl-Gn; ENSG00000230726; homo_sapiens. DR Ensembl-Gn; ENSG00000234794; homo_sapiens. DR Ensembl-Tr; ENST00000383127; homo_sapiens. DR Ensembl-Tr; ENST00000383259; homo_sapiens. DR Ensembl-Tr; ENST00000395388; homo_sapiens. DR Ensembl-Tr; ENST00000411524; homo_sapiens. DR Ensembl-Tr; ENST00000414698; homo_sapiens. DR Ensembl-Tr; ENST00000416883; homo_sapiens. DR Ensembl-Tr; ENST00000442960; homo_sapiens. DR IMGT/HLA; DRA*01:01:01:01; HLA00662. XX CC [2] corrects [1]. CC Not certain on number of n's after base 258 or base 1915. Sequence CC shown is from [2], which corrects [1]. XX FH Key Location/Qualifiers FH FT source 1..2293 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT repeat_region 107..370 FT /note="alu repetitive sequence" FT exon 1151..1296 FT /number=1 FT /note="HLA-DR alpha-chain" FT sig_peptide 1215..1289 FT intron 1297..>2293 FT /note="HLA-DR alpha-chain intron A" XX SQ Sequence 2293 BP; 687 A; 453 C; 478 G; 669 T; 6 other; agatctttaa taatcatatg acaagagaaa aactttcata atcttatgac atgagggaag 60 gaatattaaa gccgttctgt gagttattat ctctaacgtt cccaatagaa taggctttgc 120 cagctgggtg cggtggctca tgcctgtaat cccagcactt tgcgaggcca aggcgggcaa 180 atcacgaggt caggagtctg agaccagcct gaccaacatg gtgaaacccc gtctctacta 240 aaaatacaaa aattagccnn ngggaggccg agattacaat gagctgagat cacaccacca 300 actccagctt gggcgacaga gcaagactct gtcaaaaaaa aaaaaaaaaa aaagaatagg 360 ctttgccact atactctctc atattcattg accttgaatc ctcaaatgag gtgtgtccat 420 tagtcaactc caatctcttg tcatatataa gatggtagag atgagaagaa ggtagctcct 480 ttacagccca ctatttccac taactactac ctgtgtttca agatacagcc tttcacctcc 540 ttctccagtg ttgagagtgt tgaacctcag agtttctcct ctcattttct ctaaatgaga 600 tacaatgcca gccatcccaa gctcttggcc tgagttgatc atcttcaagt ctaggactcc 660 aagaagcatg aaaagagctt ctttagtgaa gctatgtcct cagtactgcc aaaattcaga 720 caatctccat ggcctgacaa tttaccttct atttgggtaa tttattgtcc cttacgcaaa 780 ctctccaact gtcattgcac agacatatga tctgtattta gctctcactt taggtgtttc 840 catcgattct attctcacta atgtgcttca ggtatatccc tgtctagaag tcagattggg 900 gttaaagagt ctgtccgtga ttgactaaca gtcttaaata cttgatttgt tgttgttgtt 960 gtcctgtttg tttaagaaac tttacttctt tatccaatga acggagtatc ttgtgtcctg 1020 gaccctttgc aagaaccctt cccctagcaa cagatgcgtc atctcaaaat atttttctga 1080 ttggccaaag agtaattgat ttgcatttta atggtcagac tctattacac cccacattct 1140 cttttctttt attcttgtct gttctgcctc actcccgagc tctactgact cccaaaagag 1200 cgcccaagaa gaaaatggcc ataagtggag tccctgtgct aggatttttc atcatagctg 1260 tgctgatgag cgctcaggaa tcatgggcta tcaaaggtag gtgctgaggg aatgaaatct 1320 gggacgatag actacgaagc attggagaaa agacctatgg acatttggaa gataatgtgt 1380 ggagtgaaag aatagtgtga caggtattat gtggtctcga cagaaagtat aacaaattgt 1440 ggtttggtgg agttcttccc tcaccacaaa ctgaagtaag tcaaatttgg tttagagggt 1500 caaaactgag ttgtgtattg gtgaatagca cggtcctgct acaagccaaa ctgggggtgg 1560 gggtgggggt gggggaggaa gaatattttc tggcaagcat taacaagtta tatttctggg 1620 ctttaattat tcttctggaa aattagtaaa attaaaaact aaaaaccaca catagttttg 1680 ctagattaat caaaaaaaaa gttattagcc ctgttcttat ctgaatacat gatacagtag 1740 ttattttttg gagtgtaaat ctgtcggtat atatcagcac atatattgtg tgaagattac 1800 tagaaggaaa agtcatcgaa aagcaacaat ttaccccagg aaaaggggag ggaaggcatg 1860 ctgatatgag ttgcctcatg ggacagtgat agccattccc tgccttccca tctccnnnag 1920 atctttatat catgttaact tagtaatatt tccaagagag tagaaaaata agtaaggaaa 1980 tggggaatct gatattattg tctctcatct ccagagcaac attggtgctg ttgtaaagat 2040 gtactgtaga aaagtattct tcacccagcg tgacccccac agaaggtgtc aggtagactt 2100 gaaataagca aagtaataac ccagctccca tacccatagt ggcaattgta gatttctatt 2160 gccccaaaag agccatacat agggatactt acctagaaag acagaggatc ttcccttggt 2220 ttgtgaagag gcagctagta tatttgtgtg tgtttgcata gatgcaaagc gtaaataaat 2280 tcctaggttt atc 2293 //