Dbfetch
ID HQ896937; SV 1; linear; genomic DNA; STD; HUM; 1642 BP.
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AC HQ896937;
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DT 31-JUL-2011 (Rel. 109, Created)
DT 31-JUL-2011 (Rel. 109, Last updated, Version 1)
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DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*55 variant allele,
DE partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1642
RA Li J.-P., Zhang X.;
RT "Identification of a new HLA-B*55 allele";
RL Unpublished.
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RN [2]
RP 1-1642
RA Li J.-P., Zhang X.;
RT ;
RL Submitted (19-JAN-2011) to the INSDC.
RL HLA Lab, Liaoning Blood Center, Beihai Street Dadong District, Shenyang,
RL Liaoning 110044, China
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DR MD5; be75d699bd1d23f8e3d9ad633c67a3bd.
DR IMGT/HLA; HLA-B*55:50; HLA06519.
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FH Key Location/Qualifiers
FH
FT source 1..1642
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1642
FT /gene="HLA-B"
FT /allele="HLA-B*55 variant"
FT mRNA join(<1..270,516..791,1367..>1642)
FT /gene="HLA-B"
FT /allele="HLA-B*55 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,516..791,1367..>1642)
FT /codon_start=3
FT /gene="HLA-B"
FT /allele="HLA-B*55 variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:G0Z6Y5"
FT /protein_id="AEK86201.1"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPREE
FT PRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTWQTMYGCDLGP
FT DGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTAAQITQLKWEAARVAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..515
FT /estimated_length=245
FT gap 792..1366
FT /estimated_length=575
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SQ Sequence 1642 BP; 180 A; 252 C; 276 G; 114 T; 820 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gaggttcgac agcgacgccg 120
cgagtccgag agaggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180
accggaacac acagatctac aaggcccagg cacagactga ccgagagagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnggtct cacacttggc agacgatgta 540
tggctgcgac ctggggccgg acgggcgcct cctccgcggg cataaccagt tagcctacga 600
cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg cggacaccgc 660
ggctcagatc acccagctca agtgggaggc ggcccgtgtg gcggagcagc tgagagccta 720
cctggagggc acgtgcgtgg agtggctccg cagatacctg gagaacggga aggagacgct 780
gcagcgcgcg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca 1380
cacgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg ggccctgggc 1440
ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac 1500
actgagcttg tggagaccag accagcagga gatagaacct tccagaagtg ggcagctgtg 1560
gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga ggggctgccg 1620
aagcccctca ccctgagatg gg 1642
//