ID HQ700661; SV 1; linear; genomic DNA; STD; HUM; 792 BP.
XX
AC HQ700661;
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DT 03-JUL-2011 (Rel. 109, Created)
DT 03-JUL-2011 (Rel. 109, Last updated, Version 1)
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DE Homo sapiens MHC class I antigen (HLA-Cw) gene, HLA-Cw*16:01:01 variant
DE allele, exons 2, 3 and partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-792
RA Lazaro A.M., Xiao Y., Hurley C.K.;
RT "Novel HLA class I allele";
RL Unpublished.
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RN [2]
RP 1-792
RA Lazaro A.M., Xiao Y., Hurley C.K.;
RT ;
RL Submitted (13-DEC-2010) to the INSDC.
RL Oncology, Georgetown University, 3970 Reservoir Rd, N.W., Washington, DC
RL 20057, USA
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DR MD5; 2b73beecb248a0eadb498eee8e6edd7f.
DR IMGT/HLA; HLA-C*16:01:06; HLA06303.
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FH Key Location/Qualifiers
FH
FT source 1..792
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>792
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*16:01:01 variant"
FT mRNA join(<1..270,517..>792)
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*16:01:01 variant"
FT /product="MHC class I antigen"
FT CDS join(<1..270,517..>792)
FT /codon_start=3
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*16:01:01 variant"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:F8SY70"
FT /protein_id="AEI87641.1"
FT /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMYGCDLGP
FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARAAEQQRAYLEGTC
FT VEWLRRYLENGKETLQRA"
FT exon 1..270
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*16:01:01 variant"
FT /number=2
FT gap 271..516
FT /estimated_length=246
FT exon 517..792
FT /gene="HLA-Cw"
FT /allele="HLA-Cw*16:01:01 variant"
FT /number=3
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SQ Sequence 792 BP; 105 A; 172 C; 199 G; 70 T; 246 other;
gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnggtc tcacaccctc cagtggatgt 540
atggctgcga cctggggccc gacgggcgcc tcctccgcgg gtatgaccag tccgcctacg 600
acggcaagga ttacatcgcc ctgaacgagg atctgcgctc ctggaccgcc gcggacacgg 660
cggctcagat cacccagcgc aagtgggagg cggcccgtgc ggcggagcag cagagagcct 720
acctggaggg cacgtgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc 780
tgcagcgcgc gg 792
//