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EBI Dbfetch

ID   HQ623149; SV 1; linear; genomic DNA; STD; HUM; 792 BP.
XX
AC   HQ623149;
XX
DT   21-JUN-2011 (Rel. 109, Created)
DT   27-APR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*06 new allele, partial
DE   cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-792
RX   DOI; 10.1111/j.1399-0039.2011.01751.x.
RX   PUBMED; 21801155.
RA   Testi M., Troiano M., Di Luzio A., Stellitano C., Andreani M.;
RT   "The novel HLA-C*06:58 allele, identified by sequence-based typing in an
RT   Italian family";
RL   Tissue Antigens 79(1):80-81(2012).
XX
RN   [2]
RP   1-792
RA   Testi M., Andreani M., Battarra M., Troiano M., Condello R.;
RT   "Sequence based typing characterization of a new HLA C*06 allele in an
RT   Italian family with a mutation in exon 3 conserved region";
RL   Unpublished.
XX
RN   [3]
RP   1-792
RA   Testi M., Andreani M., Battarra M., Troiano M., Condello R.;
RT   ;
RL   Submitted (12-NOV-2010) to the INSDC.
RL   Tor Vergata Hospital, LIBT Fondazione IME, viale Oxford 81, Rome, RM 00133,
RL   Italy
XX
DR   MD5; bb1d4c2bbd903ed9e6e3319cd17e7694.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..792
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>792
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06 new"
FT   mRNA            join(<1..270,517..>792)
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06 new"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,517..>792)
FT                   /codon_start=3
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06 new"
FT                   /product="MHC class I antigen"
FT                   /note="HLA-Cw6 antigen"
FT                   /db_xref="GOA:F8SHX6"
FT                   /db_xref="IMGT/HLA:C*06:58"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:F8SHX6"
FT                   /protein_id="AEH41457.1"
FT                   /translation="SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWIYGCDLGP
FT                   DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTC
FT                   VEWLRRYLENGKETLQRA"
FT   gap             271..516
FT                   /estimated_length=246
XX
SQ   Sequence 792 BP; 107 A; 170 C; 199 G; 70 T; 246 other;
     gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc        60
     gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccc cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac       240
     tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnggtc tcacaccctc cagtggatat       540
     atggctgcga cctggggccc gacgggcgcc tcctccgcgg gtatgaccag tccgcctacg       600
     acggcaagga ttacatcgcc ctgaacgagg acctgcgctc ctggaccgcc gcggacacgg       660
     cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag tggagagcct       720
     acctggaggg cacgtgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc       780
     tgcagcgcgc gg                                                           792
//


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