Dbfetch

ID   HQ589089; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC   HQ589089;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   15-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Homo sapiens isolate cell ID D10014741 MHC class I antigen (HLA-B) gene,
DE   HLA-B*58:01:01 variant allele, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1022
RA   Qu J., Li J., Chen H., Zheng Z., Liao K., Wang L., Zhou M., Huang C.,
RA   Hu Z., Yin J., Deng X., Cen Y., Zhang W., Zhang M., Tang J., Liang J.,
RA   Cheng Z., Long Y., Lan Z., Ye M., Zhen H., Zhang H., Tian Z., Hua S.,
RA   Tao D., Chen C., Pan J., Liu X., Xue Y., Wu S., Zhang K., Zhu H., Huang H.,
RA   Zhou C., Yang X., Ni J., Mai L., Zheng K., Liu B., Tang L., Zhang L.,
RA   Shen M., Huang J., Song X., Yi X., Wen J., Qian P., Wang Y., Wu D., Fan Z.,
RA   Zheng M., Liu P.;
RT   "Identification of novel HLA alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-1022
RA   Qu J., Li J., Chen H., Zheng Z., Liao K., Wang L., Zhou M., Huang C.,
RA   Hu Z., Yin J., Deng X., Cen Y., Zhang W., Zhang M., Tang J., Liang J.,
RA   Cheng Z., Long Y., Lan Z., Ye M., Zhen H., Zhang H., Tian Z., Hua S.,
RA   Tao D., Chen C., Pan J., Liu X., Xue Y., Wu S., Zhang K., Zhu H., Huang H.,
RA   Zhou C., Yang X., Ni J., Mai L., Zheng K., Liu B., Tang L., Zhang L.,
RA   Shen M., Huang J., Song X., Yi X., Wen J., Qian P., Wang Y., Wu D., Fan Z.,
RA   Zheng M., Liu P.;
RT   ;
RL   Submitted (08-NOV-2010) to the INSDC.
RL   Healthcare Dep., BGI, Beishan Industrial Zone, Yantian District, Shenzhen,
RL   Guangdong 518083, China
XX
DR   MD5; 7c9b3d43cf409badbb42f976a9b101f2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1022
FT                   /organism="Homo sapiens"
FT                   /isolate="cell ID D10014741"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1022
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*58:01:01 variant"
FT   mRNA            join(<1..270,371..646,747..>1022)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*58:01:01 variant"
FT                   /product="MHC class I antigen"
FT   CDS             join(<1..270,371..646,747..>1022)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*58:01:01 variant"
FT                   /product="MHC class I antigen"
FT                   /db_xref="IMGT/HLA:B*58:01:09"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="UniProtKB/TrEMBL:F2XI45"
FT                   /protein_id="ADZ38955.1"
FT                   /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTE
FT                   PRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGP
FT                   DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLC
FT                   VEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   gap             647..746
FT                   /estimated_length=unknown
XX
SQ   Sequence 1022 BP; 174 A; 256 C; 276 G; 116 T; 200 other;
     gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgat agcgacgccg       120
     cgagtccgag gacggagccc cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     acggggagac acggaacatg aaggcctccg cgcagactta ccgagagaac ctgcggatcg       240
     cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn ggtctcacat catccagagg atgtatggct gcgacctggg gcccgacggg       420
     cgcctcctcc gcgggcatga ccagtccgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg       540
     gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg       600
     ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccgt       780
     ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac       840
     actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag       900
     accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga       960
     gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg      1020
     gg                                                                     1022
//