Dbfetch

ID   HQ324122; SV 1; linear; genomic DNA; STD; HUM; 652 BP.
XX
AC   HQ324122;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 1)
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DE   Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*02:02Variant
DE   allele, exons 2, 3 and partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-652
RA   Qu J., Li J., Chen H., Shen M., Zhou M., Wang L., Liao K., Huang C., Hu Z.,
RA   Zhang M., Zhang H., Tian Z., Wen J., Song X., Huang J., Zheng Z.;
RT   "Identification of novel HLA alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-652
RA   Qu J., Li J., Chen H., Shen M., Zhou M., Wang L., Liao K., Huang C., Hu Z.,
RA   Zhang M., Zhang H., Tian Z., Wen J., Song X., Huang J., Zheng Z.;
RT   ;
RL   Submitted (29-SEP-2010) to the INSDC.
RL   Healthcare Dep., BGI, Beishan Industrial Zone, Yantian District, Shenzhen
RL   518083, China, Shenzhen, Guangdong 518083, China
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DR   MD5; 23b20c4ac799c35d9880edf99be3e9b6.
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FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="D10013034"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>652
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:02Variant"
FT   mRNA            join(<1..270,371..>652)
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:02Variant"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..>652)
FT                   /codon_start=3
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:02Variant"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:F1CK20"
FT                   /db_xref="IMGT/HLA:DQB1*02:06"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="UniProtKB/TrEMBL:F1CK20"
FT                   /protein_id="ADX97421.1"
FT                   /translation="DFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAV
FT                   TLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEAL
FT                   NHHNLLVCSVTDFYPAQIKVRWFRNGQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRG
FT                   DIYTCHVEHPSLQSPITVEW"
FT   exon            1..270
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:02Variant"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..652
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:02Variant"
FT                   /number=3
XX
SQ   Sequence 652 BP; 123 A; 159 C; 170 G; 100 T; 100 other;
     aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggaca gagcgcgtgc        60
     gtcttgtgag cagaagcatc tataaccgag aagagatcgt gcgcttcgac agcgacgtgg       120
     gggagttccg ggcggtgacg ctgctggggc tgcctgccgc cgagtactgg aacagccaga       180
     aggacatcct ggagaggaaa cgggcggcgg tggacagggt gtgcagacac aactaccagt       240
     tggagctccg cacgaccttg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac       420
     cacaacctgc tggtctgctc ggtgacagat ttctatccag cccagatcaa agtccggtgg       480
     tttcggaatg gccaggagga gacagctggc gttgtgtcca ccccccttat taggaatggt       540
     gactggacct tccagatcct ggtgatgctg gaaatgactc cccagcgtgg agacatctac       600
     acctgccacg tggagcaccc cagcctccag agccccatca ccgtggagtg gc               652
//