spacer

EBI Dbfetch

ID   HM122195; SV 1; linear; genomic DNA; STD; HUM; 1243 BP.
XX
AC   HM122195;
XX
DT   19-APR-2011 (Rel. 108, Created)
DT   19-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Homo sapiens nonfunctional MHC class I antigen (HLA-B) gene,
DE   HLA-B*35:01:01variant5 allele, partial sequence.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1243
RA   Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA   Wang L., Shen M., Zhang H., Jiang F.;
RT   "Identification of 47 novel HLA-B alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-1243
RA   Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA   Wang L., Shen M., Zhang H., Jiang F.;
RT   ;
RL   Submitted (14-APR-2010) to the INSDC.
RL   Beijing Genomics Institute, Shenzhen, Beishan Industrial Zone, Yantian
RL   District, Shenzhen, Guangdong 518083, China
XX
DR   MD5; 365b1ac290073697fe4560ca45cfc5dd.
DR   IMGT/HLA; B*35:145N; HLA05272.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1243
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1243
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT   misc_feature    join(<1..270,371..650,751..1026,1127..>1243)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT                   /note="nonfunctional MHC class I antigen due to mutation;
FT                   human leukocyte antigen"
FT   exon            <1..270
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT                   /number=1
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..650
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT                   /number=2
FT   gap             651..750
FT                   /estimated_length=unknown
FT   exon            751..1026
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT                   /number=3
FT   gap             1027..1126
FT                   /estimated_length=unknown
FT   exon            1127..>1243
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:01:01variant5"
FT                   /number=4
XX
SQ   Sequence 1243 BP; 198 A; 290 C; 309 G; 146 T; 300 other;
     gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg       120
     cgagtccgag gacggagccc cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     accggaacac acagatcttc aagaccaaca cacagactta ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn ggtctcacat catccagagg atgtatggct gcgacctggg gcccgacggg       420
     cgcctcctcc gcgggcatga ccagtccgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg       540
     gaggcggccc gtgtggcggg cggagcagct gagagcctac ctggagggcc tgtgcgtgga       600
     gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn accccccaaa gacacacgtg acccaccacc       780
     ccgtctctga ccatgaggcc accctgaggt gctgggccct gggcttctac cctgcggaga       840
     tcacactgac ctggcagcgg gatggcgagg accaaactca ggacactgag cttgtggaga       900
     ccagaccagc aggagataga accttccaga agtgggcagc tgtggtggtg ccttctggag       960
     aagagcagag atacacatgc catgtacagc atgaggggct gccgaagccc ctcaccctga      1020
     gatgggnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnagcc atcttcccag      1140
     tccaccatcc ccatcgtggg cattgttgct ggcctggctg tcctagcagt tgtggtcatc      1200
     ggagctgtgg tcgctactgt gatgtgtagg aggaagagct cag                        1243
//


spacer
spacer