ID HM122190; SV 1; linear; genomic DNA; STD; HUM; 1412 BP.
XX
AC HM122190;
XX
DT 19-APR-2011 (Rel. 108, Created)
DT 19-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*27:04:01variant3
DE allele, exons 1 through 5 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1412
RA Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA Wang L., Shen M., Zhang H., Jiang F.;
RT "Identification of 47 novel HLA-B alleles";
RL Unpublished.
XX
RN [2]
RP 1-1412
RA Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA Wang L., Shen M., Zhang H., Jiang F.;
RT ;
RL Submitted (14-APR-2010) to the INSDC.
RL Beijing Genomics Institute, Shenzhen, Beishan Industrial Zone, Yantian
RL District, Shenzhen, Guangdong 518083, China
XX
DR MD5; 11d8c9026efa26d62c061f3044b108e3.
DR IMGT/HLA; HLA-B*27:69; HLA05269.
XX
FH Key Location/Qualifiers
FH
FT source 1..1412
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /country="China"
FT /db_xref="taxon:9606"
FT gene <1..>1412
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..>1412)
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..>1412)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /product="MHC class I antigen"
FT /note="human leukocyte antigen"
FT /db_xref="GOA:F4YTD9"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:F4YTD9"
FT /protein_id="AEB66072.1"
FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR
FT FITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDRESLRT
FT LLRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPGEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLLKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSS"
FT exon <1..73
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /number=1
FT gap 74..173
FT /estimated_length=unknown
FT exon 174..443
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /number=2
FT gap 444..543
FT /estimated_length=unknown
FT exon 544..819
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /number=3
FT gap 820..919
FT /estimated_length=unknown
FT exon 920..1195
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /number=4
FT gap 1196..1295
FT /estimated_length=unknown
FT exon 1296..>1412
FT /gene="HLA-B"
FT /allele="HLA-B*27:04:01variant3"
FT /number=5
XX
SQ Sequence 1412 BP; 201 A; 312 C; 343 G; 156 T; 400 other;
atgcgggtca cggcgccccg aaccctcctc ctgctgctct ggggggcagt ggccctgacc 60
gagacctggg ctgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttccaca cctccgtgtc ccggcccggc cgcggggagc cccgcttcat 240
caccgtgggc tacgtggacg acacgctgtt cgtgaggttc gacagcgacg ccgcgagtcc 300
gagagaggag ccgcgggcgc cgtggataga gcaggagggg ccggagtatt gggaccggga 360
gacacagatc tgcaaggcca aggcacagac tgaccgagag agcctgcgga ccctgctccg 420
ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnggtctca caccctccag aatatgtatg gctgcgacgt ggggccggac gggcgcctcc 600
tccgcgggta ccaccaggac gcctacgacg gcaaggatta catcgccctg aacgaggacc 660
tgagctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg 720
cccgtgaggc ggagcagctg agagcctacc tggagggcga gtgcgtggag tggctccgca 780
gatacctgga gaacgggaag gagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna ccccccaaag acacacgtga cccaccaccc catctctgac 960
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctggggagat cacactgacc 1020
tggcagcggg atggcgagga ccaaactcag gacactgagc ttgtggagac cagaccagca 1080
ggagatagaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 1140
tacacatgcc atgtacagca tgaggggctg ctgaagcccc tcaccctgag atgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagt ccaccgtccc 1320
catcgtgggc attgttgctg gcctggctgt cctagcagtt gtggtcatcg gagctgtggt 1380
cgctgctgtg atgtgtagga ggaagagctc ag 1412
//