Dbfetch

ID   HM122188; SV 1; linear; genomic DNA; STD; HUM; 1194 BP.
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AC   HM122188;
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DT   19-APR-2011 (Rel. 108, Created)
DT   19-APR-2011 (Rel. 108, Last updated, Version 1)
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DE   Homo sapiens nonfunctional MHC class I antigen (HLA-B) gene,
DE   HLA-B*27:04:01variant1 allele, partial sequence.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1194
RA   Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA   Wang L., Shen M., Zhang H., Jiang F.;
RT   "Identification of 47 novel HLA-B alleles";
RL   Unpublished.
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RN   [2]
RP   1-1194
RA   Qu J., Li J., Du J., Chen H., Liao K., Tian Z., Zhen H., Chen Y., Huang C.,
RA   Wang L., Shen M., Zhang H., Jiang F.;
RT   ;
RL   Submitted (14-APR-2010) to the INSDC.
RL   Beijing Genomics Institute, Shenzhen, Beishan Industrial Zone, Yantian
RL   District, Shenzhen, Guangdong 518083, China
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DR   MD5; 59f5933bd20e1004f3db86ee6d988a58.
DR   IMGT/HLA; B*27:66N; HLA05267.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1194
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1194
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT   misc_feature    join(1..73,174..443,544..818,919..>1194)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT                   /note="nonfunctional MHC class I antigen due to mutation;
FT                   human leukocyte antigen"
FT   exon            <1..73
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT                   /number=1
FT   gap             74..173
FT                   /estimated_length=unknown
FT   exon            174..443
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT                   /number=2
FT   gap             444..543
FT                   /estimated_length=unknown
FT   exon            544..818
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT                   /number=3
FT   gap             819..918
FT                   /estimated_length=unknown
FT   exon            919..>1194
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*27:04:01variant1"
FT                   /number=4
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SQ   Sequence 1194 BP; 185 A; 282 C; 304 G; 123 T; 300 other;
     atgcgggtca cggcgccccg aaccctcctc ctgctgctct ggggggcagt ggccctgacc        60
     gagacctggg ctgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca       180
     ctccatgagg tatttccaca cctccgtgtc ccggcccggc cgcggggagc cccgcttcat       240
     caccgtgggc tacgtggacg acacgctgtt cgtgaggttc gacagcgacg ccgcgagtcc       300
     gagagaggag ccgcgggcgc cgtggataga gcaggagggg ccggagtatt gggaccggga       360
     gacacagatc tgcaaggcca aggcacagac tgaccgagag agcctgcgga ccctgctccg       420
     ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       540
     nnnggtctca caccctccag aatatgtatg gctgcgacgt ggggccggac gggcgcctcc       600
     tccgcgggta ccaccaggac gcctacgacg gcaaggatta catcgccctg aacgaggacc       660
     tgagctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg       720
     cccgtgaggc ggagcagctg agagccacct ggagggcgag tgcgtggagt ggctccgcag       780
     atacctggag aacgggaagg agacgctgca gcgcgcggnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnac cccccaaaga cacacgtgac ccaccacccc atctctgacc       960
     atgaggccac cctgaggtgc tgggccctgg gcttctaccc tggggagatc acactgacct      1020
     ggcagcggga tggcgaggac caaactcagg acactgagct tgtggagacc agaccagcag      1080
     gagatagaac cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat      1140
     acacatgcca tgtacagcat gaggggctgc cgaagcccct caccctgaga tggg            1194
//