Dbfetch
ID HG973333; SV 1; linear; genomic DNA; STD; HUM; 2699 BP. XX AC HG973333; XX DT 17-APR-2014 (Rel. 120, Created) DT 17-APR-2014 (Rel. 120, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for MHC class I antigen, cell line DE DKMS-LSL-A-109, allele HLA-A*03, exons 2-8 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2699 RA Albrecht V.; RT ; RL Submitted (15-APR-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; 049fd4343af4541a13dfbb74a8d1e879. DR IMGT/HLA; HLA-A*03:196; HLA11966. XX FH Key Location/Qualifiers FH FT source 1..2699 FT /organism="Homo sapiens" FT /chromosome="6" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-A-109" FT /cell_type="blood cells" FT /db_xref="taxon:9606" FT CDS join(<1..270,512..787,1366..1641,1744..1860,2303..2335, FT 2478..2525,2695..2699) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:X5MFE4" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:X5MFE4" FT /protein_id="CDO67976.1" FT /translation="SHSTRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGCDVGS FT DGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTC FT VEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTI FT PIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV FT " FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=2 FT intron 271..511 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=2 FT exon 512..787 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=3 FT intron 788..1365 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=3 FT exon 1366..1641 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=4 FT intron 1642..1743 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=4 FT exon 1744..1860 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=5 FT intron 1861..2302 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=5 FT exon 2303..2335 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=6 FT intron 2336..2477 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=6 FT exon 2478..2525 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=7 FT intron 2526..2694 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=7 FT exon 2695..>2699 FT /gene="HLA-A" FT /allele="HLA-A*03" FT /number=8 XX SQ Sequence 2699 BP; 530 A; 758 C; 829 G; 582 T; 0 other; gctcccactc cacgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180 accaggagac acggaatgtg aaggcccagt cacagactga ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggccgggg gcgcaggtca 300 ggacccctca tcccccacgg acgggccagg tcgcccacag tctccgggtc cgagatccac 360 cccgaagccg cgggaccccg agacccttgc cccgggagag gcccaggcgc ctttacccgg 420 tttcattttc agtttaggcc aaaaatcccc ccgggttggt cggggctggg cggggctcgg 480 gggactgggc tgaccgcggg gtcggggcca ggttctcaca ccatccagat aatgtatggc 540 tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc ggcaggacgc ctacgacggc 600 aaggattaca tcgccctgaa cgaggacctg cgctcttgga ccgcggcgga catggcggct 660 cagatcacca agcgcaagtg ggaggcggcc catgaggcgg agcagttgag agcctacctg 720 gatggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 780 cgcacgggta ccaggggcca cggggcgcct ccctgatcgc ctgtagatct cccgggctgg 840 cctcccacaa ggaggggaga caattgggac caacactaga atatcaccct ccctctggtc 900 ctgagggaga ggaatcctcc tgggttccag atcctgtacc agagagtgac tctgaggttc 960 cgccctgctc tctgacacaa ttaagggata aaatctctga aggagtgacg ggaagacgat 1020 ccctcgaata ctgatgagtg gttccctttg acaccggcag cagccttggg cccgtgactt 1080 ttcctctcag gccttgttct ctgcttcaca ctcaatgtgt gtgggggtct gagtccagca 1140 cttctgagtc cctcagcctc cactcaggtc aggaccagaa gtcgctgttc ccttctcagg 1200 gaatagaaga ttatcccagg tgcctgtgtc caggctggtg tctgggttct gtgctctctt 1260 ccccatcccg ggtgtcctgt ccattctcaa gatggccaca tgcgtgctgg tggagtgtcc 1320 catgacagat gcaaaatgcc tgaattttct gactcttccc gtcagacccc cccaagacac 1380 atatgaccca ccaccccatc tctgaccatg aggccaccct gaggtgctgg gccctgggct 1440 tctaccctgc ggagatcaca ctgacctggc agcgggatgg ggaggaccag acccaggaca 1500 cggagctcgt ggagaccagg cctgcagggg atggaacctt ccagaagtgg gcggctgtgg 1560 tggtgccttc tggagaggag cagagataca cctgccatgt gcagcatgag ggtctgccca 1620 agcccctcac cctgagatgg ggtaaggagg gagatggggg tgtcatgtct cttagggaaa 1680 gcaggagcct ctctggagac ctttagcagg gtcagggccc ctcaccttcc cctcttttcc 1740 cagagctgtc ttcccagccc accatcccca tcgtgggcat cattgctggc ctggttctcc 1800 ttggagctgt gatcactgga gctgtggtcg ctgccgtgat gtggaggagg aagagctcag 1860 gtggagaagg ggtgaagggt ggggtctgag atttcttgtc tcactgaggg ttccaagccc 1920 cagctagaaa tgtgccctgt ctcattactg ggaagcaccg tccacaatca tgggcctacc 1980 cagtctgggc cctgtgtgcc agcacttact cttttgtaaa gcacctgtta aaatgaagga 2040 cagatttatc accttgatta cggcggtgat gggacctgat cccagcagtc acaagtcaca 2100 ggggaaggtc cctgaggaca gacctcagga gggctattgg tccaggaccc acacctgctt 2160 tcttcatgtt tcctgatccc gccctgggtc tgcagtcaca catttctgga aacttctctg 2220 gggtccaaga ctaggaggtt cctctaggac cttaaggccc tggctccttt ctggtatctc 2280 acaggacatt ttcttctcac agatagaaaa ggagggagtt acactcaggc tgcaagtaag 2340 tatgaaggag gctgatgcct gaggtccttg ggatattgtg tttgggagcc catgggggag 2400 cccacccacc tcacaattcc tcctctagcc acatcttctg tgggatctga ccaggttctg 2460 tttttgttct accccaggca gtgacagtgc ccagggctct gatgtgtccc tcacagcttg 2520 taaaggtgag agcttggagg acctaatgtg tgttgggtgt tgggcggaac agtggacaca 2580 gctgtgctat ggggtttctt tgcattggat gtattgagca tgcgatgggc tgtttaaggt 2640 gtgacccctc actgtgatgg atatgaattt gttcatgaat atttttttct atagtgtga 2699 //