ID HE995399; SV 1; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC HE995399;
XX
DT 24-SEP-2012 (Rel. 114, Created)
DT 24-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE Homo sapiens partial HLA-DPB1 gene for MHC class II antigen, allele
DE HLA-DPB1*02:01, exons 2-3, bio-material DKMS-LSL-DRB1-16
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-646
RA Boehme I.;
RT ;
RL Submitted (14-SEP-2012) to the INSDC.
RL Research and Development, DKMS Life Science Lab GmbH, Fiedlerstr. 34,
RL Saxony, Dresden/01307, GERMANY.
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RN [2]
RX DOI; https://doi.org/10.1111/tan.13057.
RX PUBMED; 28547825.
RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A.,
RA Winkler S., Lange V., Bohme I., Schmidt A.H.;
RT "Dual redundant sequencing strategy: Full-length gene characterisation of
RT 1056 novel and confirmatory HLA alleles";
RL HLA. -:1-9(2017).
XX
DR MD5; 9d7a3caf51eb04906a2260da5456f14e.
DR IMGT/HLA; DPB1*141:01; HLA08802.
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FH Key Location/Qualifiers
FH
FT source 1..646
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /bio_material="DKMS-LSL-DRB1-16"
FT CDS join(<1..264,365..>646)
FT /codon_start=3
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:01"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:K0PBH6"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="UniProtKB/TrEMBL:K0PBH6"
FT /protein_id="CCM44320.1"
FT /translation="NYLFQGRQECYAFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTE
FT LGRPDEEYWNSQKDILEEERAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQH
FT HNLLVCHVTDFYPGSIQVQWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDV
FT YTCQVEHTSLDSPVTVEW"
FT exon 1..264
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:01"
FT /number=2
FT gap 265..364
FT /estimated_length=unknown
FT exon 365..646
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:01"
FT /number=3
XX
SQ Sequence 646 BP; 127 A; 146 C; 175 G; 98 T; 100 other;
agaattacct tttccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc 60
tggagagata catctacaac cgggaggagt tcgtgcgctt cgacagcgac gtgggggagt 120
tccgggcggt gacggagctg gggcggcctg atgaggagta ctggaacagc cagaaggaca 180
tcctggagga ggagcgggca gtgccggaca ggatgtgcag acacaactac gagctgggcg 240
ggcccatgac cctgcagcgc cgagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnntccagc ctagggtgaa tgtttccccc tccaagaagg ggcccttgca gcaccacaac 420
ctgcttgtct gccacgtgac ggatttctac ccaggcagca ttcaagtcca atggttcctg 480
aatggacagg aggaaacagc tggggtcgtg tccaccaacc tgatccgtaa tggagactgg 540
accttccaga tcctggtgat gctggaaatg accccccagc agggagatgt ctacacctgc 600
caagtggagc acaccagcct ggatagtcct gtcaccgtgg agtgga 646
//
