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EBI Dbfetch

ID   HE995399; SV 1; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC   HE995399;
XX
DT   24-SEP-2012 (Rel. 114, Created)
DT   24-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Homo sapiens partial HLA-DPB1 gene for MHC class II antigen, allele
DE   HLA-DPB1*02:01, exons 2-3, bio-material DKMS-LSL-DRB1-16
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-646
RA   Boehme I.;
RT   ;
RL   Submitted (14-SEP-2012) to the INSDC.
RL   Research and Development, DKMS Life Science Lab GmbH, Fiedlerstr. 34,
RL   Saxony, Dresden/01307, GERMANY.
XX
RN   [2]
RA   Albrecht V., Boehme I., Schmidt A.H.;
RT   "Characterisation and Confirmation of new HLA-Alleles found by DKMS Life
RT   Science Lab";
RL   Unpublished.
XX
DR   MD5; 9d7a3caf51eb04906a2260da5456f14e.
DR   IMGT/HLA; DPB1*141:01; HLA08802.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /bio_material="DKMS-LSL-DRB1-16"
FT   CDS             join(<1..264,365..>646)
FT                   /codon_start=3
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*02:01"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="GOA:K0PBH6"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="UniProtKB/TrEMBL:K0PBH6"
FT                   /protein_id="CCM44320.1"
FT                   /translation="NYLFQGRQECYAFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTE
FT                   LGRPDEEYWNSQKDILEEERAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQH
FT                   HNLLVCHVTDFYPGSIQVQWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDV
FT                   YTCQVEHTSLDSPVTVEW"
FT   exon            1..264
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*02:01"
FT                   /number=2
FT   gap             265..364
FT                   /estimated_length=unknown
FT   exon            365..646
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*02:01"
FT                   /number=3
XX
SQ   Sequence 646 BP; 127 A; 146 C; 175 G; 98 T; 100 other;
     agaattacct tttccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc        60
     tggagagata catctacaac cgggaggagt tcgtgcgctt cgacagcgac gtgggggagt       120
     tccgggcggt gacggagctg gggcggcctg atgaggagta ctggaacagc cagaaggaca       180
     tcctggagga ggagcgggca gtgccggaca ggatgtgcag acacaactac gagctgggcg       240
     ggcccatgac cctgcagcgc cgagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnntccagc ctagggtgaa tgtttccccc tccaagaagg ggcccttgca gcaccacaac       420
     ctgcttgtct gccacgtgac ggatttctac ccaggcagca ttcaagtcca atggttcctg       480
     aatggacagg aggaaacagc tggggtcgtg tccaccaacc tgatccgtaa tggagactgg       540
     accttccaga tcctggtgat gctggaaatg accccccagc agggagatgt ctacacctgc       600
     caagtggagc acaccagcct ggatagtcct gtcaccgtgg agtgga                      646
//


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