Dbfetch

ID   HE806315; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC   HE806315;
XX
DT   11-MAY-2012 (Rel. 112, Created)
DT   11-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Homo sapiens partial HLA-A gene, for MHC class I antigen allele HLA-A*02
DE   allele, exons 2-3
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1022
RA   Masson D.M.;
RT   ;
RL   Submitted (07-MAY-2012) to the INSDC.
RL   Masson D.M., EFS Rhone Alpes, HLA-Laboratory, BP35, 38701, FRANCE.
XX
RN   [2]
RX   DOI; https://doi.org/10.1111/tan.13056.
RX   PUBMED; 28508589.
RA   Proust B., Masson D., Proust B.P., Baudron M., Dehaut F.;
RT   "Identification of a novel HLA allele, HLA-B*41:50, in a French
RT   individual";
RL   HLA. 0:0(2017).
XX
DR   MD5; 47b0a477e262dc7aaca3b03b7b50ed0a.
DR   IMGT/HLA; HLA-A*02:373N; HLA08129.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1022
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /PCR_primers="fwd_name: ValG15, fwd_seq:
FT                   tggcgccccgaaccctcg, rev_name: Intron6A, rev_seq:
FT                   gcccacagaasatgtggctag"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<1..270,371..>513)
FT                   /codon_start=3
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:I2GUL0"
FT                   /protein_id="CCH57812.1"
FT                   /translation="SHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASRRME
FT                   PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTLQRMYGCDVGS
FT                   DWRFLRGYHQYAYDGKDYIALKEDLRSWTAADM"
FT   exon            <1..270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..>513
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02"
FT                   /number=3
FT   gap             647..746
FT                   /estimated_length=unknown
XX
SQ   Sequence 1022 BP; 170 A; 245 C; 283 G; 124 T; 200 other;
     gctctcactc catgaggtat ttctacacct ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccggag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg       180
     acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn gttctcacac cctccagagg atgtatggct gcgacgtggg gtcggactgg       420
     cgcttcctgc gcgggtacca ccagtacgcc tacgacggca aggattacat cgccctgaaa       480
     gaggacctgc gctcttggac cgcggcggac atggcagctc agaccaccaa gcacaagtgg       540
     taggcggccc atgtggcgga gcagtggaga gcctacctgg agggcacgtg cgtggagtgg       600
     ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacggnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnacgc ccccaaaacg catatgactc accacgctgt       780
     ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac       840
     actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag       900
     gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggacagga       960
     gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg      1020
     gg                                                                     1022
//