ID HE804251; SV 1; linear; genomic DNA; STD; HUM; 652 BP.
XX
AC HE804251;
XX
DT 01-JUN-2012 (Rel. 113, Created)
DT 03-SEP-2014 (Rel. 122, Last updated, Version 2)
XX
DE Homo sapiens partial HLA-DQB1 gene for MHC class II antigen, isolate
DE D10026100, allele DQB1*06:01:10, exons 2-3
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-652
RA BGI H.;
RT ;
RL Submitted (31-MAR-2012) to the INSDC.
RL BGI, Main Building 9/F, Beishan Industrial Zone, Yantia, Shenzhen 518083,
RL CHINA.
XX
RN [2]
RA Li J.;
RT "Characterization of novel allele at the HLA -DRB1 loci from National
RT Marrow Donor Program volunteer donors";
RL Unpublished.
XX
DR MD5; 120b267c3f251f110debaa5ea4f4e45c.
DR IMGT/HLA; HLA-DQB1*06:01:10; HLA09871.
XX
FH Key Location/Qualifiers
FH
FT source 1..652
FT /organism="Homo sapiens"
FT /isolate="D10026100"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT CDS join(<1..270,371..>652)
FT /codon_start=3
FT /gene="HLA-DQB1"
FT /allele="DQB1*06:01:10"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:I4EPK0"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="UniProtKB/TrEMBL:I4EPK0"
FT /protein_id="CCH35870.1"
FT /translation="DFVLQFKAMCYFTNGTERVRYVTRYIYNREEDVRFDSDVGVYRAV
FT TPQGRPDAEYWNSQKDILERTRAELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEAL
FT NHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQHG
FT DVYTCHVEHPSLQSPITVEW"
FT exon 1..270
FT /gene="HLA-DQB1"
FT /allele="DQB1*06:01:10"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..652
FT /gene="HLA-DQB1"
FT /allele="DQB1*06:01:10"
FT /number=3
XX
SQ Sequence 652 BP; 124 A; 155 C; 172 G; 101 T; 100 other;
aggatttcgt gctccagttt aaggccatgt gctacttcac caatgggacg gagcgcgtgc 60
gttatgtgac cagatacatc tataaccgag aggaggacgt gcgcttcgac agcgacgtgg 120
gggtgtatcg ggcggtgacg ccgcaggggc ggcctgacgc cgagtactgg aacagccaga 180
aggacatcct ggagaggacc cgagcggagt tggacacggt gtgcagacac aactacgagg 240
tggcgttccg cgggatcttg cagaggagag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac 420
cacaacctgc tggtctgctc ggtgacagat ttctatccag gccagatcaa agtccggtgg 480
tttcggaatg accaggagga gacagctggc gttgtgtcca ccccccttat taggaacggt 540
gactggacct tccagatcct ggtgatgctg gaaatgactc cccagcatgg agatgtctac 600
acctgccacg tggagcaccc cagcctccag agccccatca ccgtggagtg gc 652
//