Dbfetch

Dbfetch

ID   GU944886; SV 1; linear; genomic DNA; STD; HUM; 1933 BP.
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AC   GU944886;
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DT   06-MAR-2011 (Rel. 108, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Homo sapiens cell-line GM17117B killer cell immunoglobulin-like receptor
DE   (KIR3DL3) gene, KIR3DL3*012 variant allele, complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1933
RX   DOI; 10.1007/s00251-011-0536-6.
RX   PUBMED; 21607693.
RA   Hou L., Jiang B., Chen M., Ng J., Hurley C.K.;
RT   "The characteristics of allelic polymorphism in killer-immunoglobulin-like
RT   receptor framework genes in African Americans";
RL   Immunogenetics 63(9):549-559(2011).
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RN   [2]
RP   1-1933
RA   Hou L., Hurley C.K., Jiang B., Chen M.;
RT   ;
RL   Submitted (24-FEB-2010) to the INSDC.
RL   Oncology/ C.W.Bill Young Department of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; c63674f725fa5dc9226e4f0bbbd6b164.
DR   IPD-KIR; KIR3DL3*01802; KIR00608.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1933
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="GM17117B"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1933
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*012 variant"
FT   mRNA            join(<1..34,135..170,271..555,656..955,1056..1349,
FT                   1450..1554,1655..1707,1808..>1933)
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*012 variant"
FT                   /product="killer cell immunoglobulin-like receptor"
FT   CDS             join(1..34,135..170,271..555,656..955,1056..1349,
FT                   1450..1554,1655..1707,1808..1933)
FT                   /codon_start=1
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*012 variant"
FT                   /product="killer cell immunoglobulin-like receptor"
FT                   /protein_id="ADY38440.1"
FT                   /translation="MSLMVVSMACVGFFLLEGPWPHVGGQDKPFLSAWPGTVVSEGQHV
FT                   TLQCRSRLGFNEFSLSKEDGMPVPELYNRIFRNSFLMGPVTPAHAGTYRCCSSHPHSPT
FT                   GWSAPSNPVVIMVTGVHRKPSLLAHPGPLVKSGETVILQCWSDVSFERFLLHREGITED
FT                   PLRLVGQLHDAGSQVNYSMGPMTPALAGTYRCFGSVTHLPYELSAPSDPLDIVVVGLYG
FT                   KPSLSAQPGPTVQAGENVTLSCSSRSLFDIYHLSREAEAGELRLTAVLRVNGTFQANFP
FT                   LGPVTHGGTYRCFGSFRALPHAWSDPSDPLPVSVTGNSRHLHVLIGTSVVIIPFAILLF
FT                   FLLHRWCANKKNAVVMDQEPAGNRTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRPSQ
FT                   RPKTPPTDTSV"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             171..270
FT                   /estimated_length=unknown
FT   gap             556..655
FT                   /estimated_length=unknown
FT   gap             956..1055
FT                   /estimated_length=unknown
FT   gap             1350..1449
FT                   /estimated_length=unknown
FT   gap             1555..1654
FT                   /estimated_length=unknown
FT   gap             1708..1807
FT                   /estimated_length=unknown
XX
SQ   Sequence 1933 BP; 258 A; 368 C; 318 G; 289 T; 700 other;
     atgtcgctca tggtcgtcag catggcgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnggttct tcttgctgga ggggccctgg ccacatgtgg nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gtggtcagga caagcccttc ctctctgcct       300
     ggcccggcac tgtggtgtct gaaggacaac atgtgactct tcagtgtcgc tctcgtcttg       360
     ggtttaatga attcagtctg tccaaagaag acgggatgcc tgtccctgag ctctacaaca       420
     gaatattccg gaacagcttt ctcatgggcc ctgtgacccc agcacatgca gggacctaca       480
     gatgttgcag ttcacaccca cactccccca ctgggtggtc ggcacccagc aaccctgtgg       540
     tgatcatggt cacagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngagtc       660
     cacagaaaac cttccctcct ggcccaccca ggtcccctgg tgaaatcggg agagacggtc       720
     atcctgcaat gttggtcaga tgtcagtttt gagcgcttcc ttctgcacag agaggggatc       780
     actgaggacc ccttgcgcct cgttggacag ctccacgatg cgggttccca ggtcaactat       840
     tccatgggtc ccatgacacc tgcccttgca gggacctaca gatgctttgg ttctgtcact       900
     cacttaccct atgagttgtc ggctcccagt gaccctctgg acatcgtggt cgtagnnnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngtcta tatgggaaac cttctctctc      1080
     agcccagccg ggccccacgg ttcaggcagg agagaatgtg accttgtcct gcagctcccg      1140
     gagcttgttt gacatttacc atctatccag ggaggcagag gccggtgaac ttaggctcac      1200
     tgcggtgctg agggtcaatg gaacattcca ggccaacttc cctctgggcc ctgtgaccca      1260
     cggagggacc tacagatgct tcggctcttt ccgtgccctg ccccacgcgt ggtcagaccc      1320
     gagtgaccca ctgcccgttt ctgtcacagn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnng taactccaga cacctgcatg ttctgattgg gacctcagtg gtcatcatcc      1500
     cctttgctat cctcctcttc tttctccttc atcgctggtg tgccaacaaa aagannnnnn      1560
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1620
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnatgctg ttgtaatgga ccaagagcct      1680
     gcagggaaca gaacagtgaa cagggagnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1740
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1800
     nnnnnnngac tctgatgaac aagaccctca ggaggtgaca tacgcacagt tgaatcactg      1860
     cgttttcaca cagagaaaaa tcactcgccc ttctcagagg cccaagacac ccccaacaga      1920
     taccagcgtg taa                                                         1933
//