Dbfetch

Dbfetch

ID   GU138983; SV 1; linear; genomic DNA; STD; HUM; 1589 BP.
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AC   GU138983;
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DT   11-AUG-2010 (Rel. 105, Created)
DT   11-AUG-2010 (Rel. 105, Last updated, Version 1)
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DE   Homo sapiens cell-line GM17159 killer cell immunoglobulin-like receptor two
DE   domains long cytoplasmic tail 3 (KIR2DL3) gene, KIR2DL3*006 variant allele,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1589
RX   DOI; 10.1007/s00251-010-0458-8.
RX   PUBMED; 20585770.
RA   Hou L., Chen M., Jiang B., Wu D., Ng J., Hurley C.K.;
RT   "Thirty allele-level haplotypes centered around KIR2DL5 define the
RT   diversity in an African American population";
RL   Immunogenetics 62(8):491-498(2010).
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RN   [2]
RP   1-1589
RA   Hou L., Hurley C.K., Jiang B., Chen M.;
RT   ;
RL   Submitted (28-OCT-2009) to the INSDC.
RL   Oncology/ C.W.Bill Young Departement of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; 50d41666a3071061cc61eb079af58499.
DR   IPD-KIR; KIR2DL3*01201; KIR00568.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1589
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="GM17159"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1589
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*006 variant"
FT   mRNA            join(<1..36,137..436,537..830,931..981,1082..1186,
FT                   1287..1336,1437..>1589)
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*006 variant"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains long cytoplasmic tail 3"
FT   CDS             join(<1..36,137..436,537..830,931..981,1082..1186,
FT                   1287..1336,1437..>1589)
FT                   /codon_start=3
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*006 variant"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains long cytoplasmic tail 3"
FT                   /protein_id="ADK93620.1"
FT                   /translation="FFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETVILQCWSDVRFQH
FT                   FLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSD
FT                   PLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGP
FT                   KVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEP
FT                   SSETGNPRHLHVLIGTSVVIILFILLLFFLLHRWCCNKKNAAVMDQEPAGNRTVNREDS
FT                   DEQDPQEVTYAQLNHCVFTQRKITHPFQRPKTPPTDIIVYTELPNAEP"
FT   gap             37..136
FT                   /estimated_length=unknown
FT   gap             437..536
FT                   /estimated_length=unknown
FT   gap             831..930
FT                   /estimated_length=unknown
FT   gap             982..1081
FT                   /estimated_length=unknown
FT   gap             1187..1286
FT                   /estimated_length=unknown
FT   gap             1337..1436
FT                   /estimated_length=unknown
XX
SQ   Sequence 1589 BP; 239 A; 299 C; 228 G; 223 T; 600 other;
     ggttcttctt gctgcagggg gcctggccac atgaggnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnngagt ccacagaaaa ccttccctcc tggcccaccc aggtcccctg       180
     gtgaaatcag aagagacagt catcctgcaa tgttggtcag atgtcaggtt tcagcacttc       240
     cttctgcaca gagaagggaa gtttaaggac actttgcacc tcattggaga gcaccatgat       300
     ggggtttcca aggccaactt ctccatcggt cccatgatgc aagaccttgc agggacctac       360
     agatgctacg gttctgttac tcactccccc tatcagttgt cagctcccag tgaccctctg       420
     gacatcgtca tcacagnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnngtct       540
     atatgagaaa ccttctctct cagcccagcc gggccccacg gttctggcag gagagagcgt       600
     gaccttgtcc tgcagctccc ggagctccta tgacatgtac catctatcca gggaggggga       660
     ggcccatgaa cgtaggttct ctgcagggcc caaggtcaac ggaacattcc aggccgactt       720
     tcctctgggc cctgccaccc acggaggaac ctacagatgc ttcggctctt tccgtgactc       780
     tccatacgag tggtcaaact cgagtgaccc actgcttgtt tctgtcacag nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gaaacccttc aaatagttgg ccttcaccca       960
     ctgaaccaag ctccgaaacc gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     ngtaacccca gacacctgca tgttctgatt gggacctcag tggtcatcat cctcttcatc      1140
     ctcctcctct tctttctcct tcatcgctgg tgctgcaaca aaaaaannnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnatgc tgctgtaatg gaccaagagc ctgcagggaa      1320
     cagaacagtg aacaggnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnngagg      1440
     actctgatga acaagaccct caggaggtga catatgcaca gttgaatcac tgcgttttca      1500
     cacagagaaa aatcactcac ccttttcaga ggcccaagac acccccaaca gatatcatcg      1560
     tgtacacgga acttccaaat gctgagccc                                        1589
//