Dbfetch

Dbfetch

ID   GU138979; SV 1; linear; genomic DNA; STD; HUM; 1713 BP.
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AC   GU138979;
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DT   11-AUG-2010 (Rel. 105, Created)
DT   11-AUG-2010 (Rel. 105, Last updated, Version 1)
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DE   Homo sapiens cell-line GM17190 killer cell immunoglobulin-like receptor two
DE   domains long cytoplasmic tail 3 (KIR2DL3) gene, KIR2DL3*005 variant allele,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1713
RX   DOI; 10.1007/s00251-010-0458-8.
RX   PUBMED; 20585770.
RA   Hou L., Chen M., Jiang B., Wu D., Ng J., Hurley C.K.;
RT   "Thirty allele-level haplotypes centered around KIR2DL5 define the
RT   diversity in an African American population";
RL   Immunogenetics 62(8):491-498(2010).
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RN   [2]
RP   1-1713
RA   Hou L., Hurley C.K., Jiang B., Chen M.;
RT   ;
RL   Submitted (28-OCT-2009) to the INSDC.
RL   Oncology/ C.W.Bill Young Departement of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; e576331b9efd865c44320c382562724b.
DR   IPD-KIR; KIR2DL3*014; KIR00571.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1713
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="GM17190"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1713
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*005 variant"
FT   mRNA            join(<1..24,125..160,261..560,661..954,1055..1105,
FT                   1206..1310,1411..1463,1564..>1713)
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*005 variant"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains long cytoplasmic tail 3"
FT   CDS             join(<1..24,125..160,261..560,661..954,1055..1105,
FT                   1206..1310,1411..1463,1564..>1713)
FT                   /codon_start=3
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*005 variant"
FT                   /product="killer cell immunoglobulin-like receptor two
FT                   domains long cytoplasmic tail 3"
FT                   /protein_id="ADK93616.1"
FT                   /translation="VVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETVILQC
FT                   WSDVRFEHFLLHREGKFKDTLRLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSP
FT                   YQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAH
FT                   ERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSN
FT                   SWPSPTEPSSETGNPRHLHVLIGTSVVIILFILLLFFLLHRWCCNKKNAVVMDQEPAGN
FT                   RTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRPSQRPKTPPTDIIVYTELPNAEP"
FT   gap             25..124
FT                   /estimated_length=unknown
FT   gap             161..260
FT                   /estimated_length=unknown
FT   gap             561..660
FT                   /estimated_length=unknown
FT   gap             955..1054
FT                   /estimated_length=unknown
FT   gap             1106..1205
FT                   /estimated_length=unknown
FT   gap             1311..1410
FT                   /estimated_length=unknown
FT   gap             1464..1563
FT                   /estimated_length=unknown
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SQ   Sequence 1713 BP; 239 A; 303 C; 241 G; 230 T; 700 other;
     tggtcgtcag catggcgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnggttct tcttgctgca gggggcctgg ccacatgagg nnnnnnnnnn nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn gagtccacag aaaaccttcc ctcctggccc acccaggtcc       300
     cctggtgaaa tcagaagaga cagtcatcct gcaatgttgg tcagatgtca ggtttgagca       360
     cttccttctg cacagagaag ggaagtttaa ggacactttg cgcctcattg gagagcacca       420
     tgatggggtc tccaaggcca acttctccat cggtcccatg atgcaagacc ttgcagggac       480
     ctacagatgc tacggttctg ttactcactc cccctatcag ttgtcagctc ccagtgaccc       540
     tctggacatc gtcatcacag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     gtctatatga gaaaccttct ctctcagccc agccgggccc cacggttctg gcaggagaga       720
     gcgtgacctt gtcctgcagc tcccggagct cctatgacat gtaccatcta tccagggaag       780
     gggaggccca tgaacgtagg ttctctgcag ggcccaaggt caacggaaca ttccaggccg       840
     actttcctct gggccctgcc acccacggag ggacctacag atgcttcggc tctttccgtg       900
     actctccata cgagtggtca aactcgagtg acccactgct tgtttctgtc acagnnnnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngaaacc cttcaaatag ttggccttca      1080
     cccactgaac caagctccga aaccgnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnngtaac cccagacacc tgcatgttct gattgggacc tcagtggtca tcatcctctt      1260
     catcctcctc ctcttctttc tccttcatcg ctggtgctgc aacaaaaaaa nnnnnnnnnn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn atgctgttgt aatggaccaa gagcctgcag      1440
     ggaacagaac agtgaacagg gagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1560
     nnngactctg atgaacaaga ccctcaggag gtgacatatg cacagttgaa tcactgcgtt      1620
     ttcacacaga gaaaaatcac tcgcccttct cagaggccca agacaccccc aacagatatc      1680
     atcgtgtaca cggaacttcc aaatgctgag ccc                                   1713
//